Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Upf3aQ3ULJ3 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm11905-201ENSMUST00000117653 678 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm15951-201ENSMUST00000118377 400 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm13155-201ENSMUST00000119277 646 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm8178-201ENSMUST00000121570 646 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm43930-201ENSMUST00000203868 845 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm44865-201ENSMUST00000207240 531 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm8681-201ENSMUST00000219115 618 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm25739-201ENSMUST00000082886 107 ntBASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Upf3aQ3ULJ3 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm25308-201ENSMUST00000104171 158 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm12294-201ENSMUST00000119723 490 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm24289-201ENSMUST00000157629 135 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm7094-201ENSMUST00000178379 366 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm8807-201ENSMUST00000179328 492 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm26991-201ENSMUST00000180950 620 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm29884-201ENSMUST00000218403 453 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm26064-201ENSMUST00000083381 109 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.61□□□□□ -1.83
Upf3aQ3ULJ3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm37303-201ENSMUST00000194202 1559 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm14771-201ENSMUST00000118249 203 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm11896-201ENSMUST00000121105 820 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm16471-201ENSMUST00000121940 618 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm22345-201ENSMUST00000122644 107 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm2892-201ENSMUST00000145537 711 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm26000-201ENSMUST00000157991 107 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm9613-201ENSMUST00000171662 196 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Mir7k-201ENSMUST00000184115 110 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm7182-201ENSMUST00000193351 732 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm44548-201ENSMUST00000208929 192 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm39147-201ENSMUST00000211376 465 ntBASIC3.6□□□□□ -1.83
Upf3aQ3ULJ3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms