Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm5277-201ENSMUST00000164923 556 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm8224-201ENSMUST00000166178 497 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm21809-201ENSMUST00000178495 468 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm17412-201ENSMUST00000179261 468 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm28917-201ENSMUST00000187294 237 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm28766-201ENSMUST00000191086 234 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm37343-201ENSMUST00000192542 111 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm33973-201ENSMUST00000195148 534 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm43440-201ENSMUST00000201957 729 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm35876-201ENSMUST00000205044 459 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm19232-201ENSMUST00000211621 652 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm25205-201ENSMUST00000082841 103 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Mir193a-201ENSMUST00000083461 66 ntBASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Trafd1Q3UDK1 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm24982-201ENSMUST00000104456 132 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm24840-201ENSMUST00000122603 147 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm22320-201ENSMUST00000157149 312 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm25667-201ENSMUST00000157701 275 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm24314-201ENSMUST00000158274 123 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm22840-201ENSMUST00000158444 136 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm23777-201ENSMUST00000158994 259 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm2966-201ENSMUST00000166052 481 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm17204-201ENSMUST00000167936 478 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm9587-201ENSMUST00000172449 454 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm27903-201ENSMUST00000175482 126 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm26915-201ENSMUST00000183080 748 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm44016-201ENSMUST00000203463 164 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm17911-201ENSMUST00000210806 877 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm5358-201ENSMUST00000212814 353 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm8785-201ENSMUST00000220259 487 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm18116-201ENSMUST00000220920 537 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm7119-201ENSMUST00000221345 695 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm8231-201ENSMUST00000221617 783 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Mir325-201ENSMUST00000083491 98 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm23104-201ENSMUST00000083722 104 ntBASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.52□□□□□ -1.85
Trafd1Q3UDK1 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm9078-201ENSMUST00000119126 617 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm15014-201ENSMUST00000120742 258 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm13557-201ENSMUST00000120771 382 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm13009-201ENSMUST00000121307 267 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm6079-201ENSMUST00000121356 404 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm25967-201ENSMUST00000157168 147 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm25981-201ENSMUST00000157921 295 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm25977-201ENSMUST00000158697 85 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm18397-201ENSMUST00000176704 587 ntBASIC3.51□□□□□ -1.85
Trafd1Q3UDK1 Gm19637-201ENSMUST00000185933 579 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms