Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm7870-201ENSMUST00000184467 616 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm29634-201ENSMUST00000188467 696 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm28699-201ENSMUST00000189193 696 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm37550-201ENSMUST00000193230 463 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm44099-201ENSMUST00000203299 112 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddb1Q3U1J4 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm22115-201ENSMUST00000103976 133 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm23923-201ENSMUST00000104108 133 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Mir208b-201ENSMUST00000104735 77 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm23987-201ENSMUST00000117039 129 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm13268-201ENSMUST00000117485 433 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm14901-201ENSMUST00000119001 283 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm11359-201ENSMUST00000120039 567 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm22601-201ENSMUST00000157595 250 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm16545-201ENSMUST00000161968 463 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm43070-201ENSMUST00000196938 415 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm36259-201ENSMUST00000197340 392 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm7041-201ENSMUST00000201227 524 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Olfr936-202ENSMUST00000216912 937 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm12582-201ENSMUST00000030555 697 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm24490-201ENSMUST00000083803 98 ntBASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddb1Q3U1J4 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm6429-201ENSMUST00000117144 475 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm6587-201ENSMUST00000120219 613 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm24441-201ENSMUST00000157235 281 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm21991-201ENSMUST00000180006 508 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm27189-201ENSMUST00000184119 190 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm37418-201ENSMUST00000195031 274 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm43556-201ENSMUST00000196186 681 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm43649-201ENSMUST00000196596 391 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm44990-201ENSMUST00000203922 217 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm45245-201ENSMUST00000210082 376 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 CT010480.5-201ENSMUST00000225026 217 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ddb1Q3U1J4 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.29□□□□□ -1.56
Ddb1Q3U1J4 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.29□□□□□ -1.56
Ddb1Q3U1J4 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms