Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm43070-201ENSMUST00000196938 415 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm43669-201ENSMUST00000198229 436 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm44468-201ENSMUST00000199516 105 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm19147-201ENSMUST00000199622 652 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm45171-201ENSMUST00000206360 736 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm45727-201ENSMUST00000212886 572 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm18903-201ENSMUST00000215343 480 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm22826-201ENSMUST00000083774 165 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Usp39Q3TIX9 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm14706-201ENSMUST00000117744 255 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm14909-201ENSMUST00000117853 351 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm14897-201ENSMUST00000118213 207 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm14927-201ENSMUST00000120283 454 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm3084-201ENSMUST00000169967 598 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Mir5106-201ENSMUST00000174936 73 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm20657-201ENSMUST00000177079 515 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm20794-201ENSMUST00000177626 628 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm21070-201ENSMUST00000182425 985 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Mir6541-201ENSMUST00000183649 110 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm28097-201ENSMUST00000187333 366 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm45200-201ENSMUST00000207434 919 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm6929-201ENSMUST00000210930 468 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm45409-201ENSMUST00000211486 252 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm22220-201ENSMUST00000082671 149 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.55□□□□□ -1.68
Usp39Q3TIX9 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Usp39Q3TIX9 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm25563-201ENSMUST00000104603 74 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm13733-201ENSMUST00000117290 535 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm9308-201ENSMUST00000119073 448 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm11881-201ENSMUST00000119408 572 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm11890-201ENSMUST00000119585 417 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm11321-201ENSMUST00000121257 902 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm22479-201ENSMUST00000122566 81 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm3362-201ENSMUST00000148102 466 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm22675-201ENSMUST00000158430 104 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm16101-201ENSMUST00000160695 430 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm16114-201ENSMUST00000161930 300 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm25942-201ENSMUST00000180080 110 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm4557-201ENSMUST00000185826 907 ntBASIC4.54□□□□□ -1.68
Usp39Q3TIX9 Gm4526-201ENSMUST00000186039 920 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms