Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Pfdn6Q03958 Gm22043-201ENSMUST00000082993 158 ntBASIC3.14□□□□□ -1.91
Pfdn6Q03958 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Pfdn6Q03958 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.14□□□□□ -1.91
Pfdn6Q03958 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Pfdn6Q03958 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Pfdn6Q03958 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.14□□□□□ -1.91
Pfdn6Q03958 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Pfdn6Q03958 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm25295-201ENSMUST00000122794 306 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm25555-201ENSMUST00000158078 111 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm38334-201ENSMUST00000195060 313 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm18487-201ENSMUST00000215826 878 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm8942-201ENSMUST00000217892 400 ntBASIC3.13□□□□□ -1.91
Pfdn6Q03958 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Pfdn6Q03958 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Mir291a-201ENSMUST00000104815 82 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm14739-201ENSMUST00000120424 802 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm26477-201ENSMUST00000122617 323 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm25807-201ENSMUST00000122783 305 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm29104-201ENSMUST00000186304 222 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm43746-201ENSMUST00000200028 317 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm43039-201ENSMUST00000202883 963 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pfdn6Q03958 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.12□□□□□ -1.91
Pfdn6Q03958 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm24096-201ENSMUST00000103905 110 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm8260-201ENSMUST00000119230 353 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm15244-201ENSMUST00000121122 130 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm14229-201ENSMUST00000121178 850 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm23028-201ENSMUST00000158773 265 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm38283-201ENSMUST00000193041 695 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm43975-201ENSMUST00000203023 481 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm8106-201ENSMUST00000213123 523 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm22979-201ENSMUST00000082609 159 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 Gm24919-201ENSMUST00000083020 106 ntBASIC3.11□□□□□ -1.91
Pfdn6Q03958 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Pfdn6Q03958 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Pfdn6Q03958 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Gm13761-201ENSMUST00000117238 807 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Gm6274-201ENSMUST00000118173 797 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Gm11253-201ENSMUST00000118486 201 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 Gm11890-201ENSMUST00000119585 417 ntBASIC3.1□□□□□ -1.91
Pfdn6Q03958 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms