Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lig3P97386 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.31□□□□□ -1.72
Lig3P97386 Gm24393-201ENSMUST00000158135 97 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm24930-201ENSMUST00000158315 83 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm17109-201ENSMUST00000163985 358 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm3221-201ENSMUST00000164869 440 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm17085-201ENSMUST00000165425 502 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm27163-201ENSMUST00000184767 409 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.31□□□□□ -1.72
Lig3P97386 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.31□□□□□ -1.72
Lig3P97386 Gm29704-201ENSMUST00000196011 253 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lig3P97386 Gm18026-201ENSMUST00000222789 727 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC167669.3-201ENSMUST00000224720 393 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.31□□□□□ -1.72
Lig3P97386 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.31□□□□□ -1.72
Lig3P97386 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lig3P97386 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lig3P97386 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lig3P97386 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lig3P97386 Gm23736-201ENSMUST00000082553 75 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Gm6361-201ENSMUST00000091031 435 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lig3P97386 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lig3P97386 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lig3P97386 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.31□□□□□ -1.72
Lig3P97386 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lig3P97386 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Lig3P97386 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.3□□□□□ -1.72
Lig3P97386 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.3□□□□□ -1.72
Lig3P97386 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Lig3P97386 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 Gm25773-201ENSMUST00000116718 127 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm15268-201ENSMUST00000118845 352 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm15019-201ENSMUST00000120148 434 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm14939-201ENSMUST00000120347 680 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm6373-201ENSMUST00000121026 360 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm13459-201ENSMUST00000121558 646 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Gm25667-201ENSMUST00000157701 275 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.3□□□□□ -1.72
Lig3P97386 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm18727-201ENSMUST00000185981 553 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.3□□□□□ -1.72
Lig3P97386 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.3□□□□□ -1.72
Lig3P97386 Gm29038-201ENSMUST00000191543 678 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm19243-201ENSMUST00000198592 269 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm43841-201ENSMUST00000199491 586 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Lig3P97386 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Gm43979-201ENSMUST00000203179 475 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm8106-201ENSMUST00000213123 523 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm18160-201ENSMUST00000214279 827 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.3□□□□□ -1.72
Lig3P97386 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.3□□□□□ -1.72
Lig3P97386 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.3□□□□□ -1.72
Lig3P97386 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.3□□□□□ -1.72
Lig3P97386 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.3□□□□□ -1.72
Lig3P97386 Mir34b-201ENSMUST00000083558 84 ntBASIC4.3□□□□□ -1.72
Lig3P97386 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lig3P97386 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lig3P97386 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.29□□□□□ -1.72
Lig3P97386 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Lig3P97386 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Lig3P97386 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Lig3P97386 Gm43369-201ENSMUST00000196373 1552 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Lig3P97386 Gm23942-201ENSMUST00000101956 107 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm22115-201ENSMUST00000103976 133 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm23923-201ENSMUST00000104108 133 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm26019-201ENSMUST00000104407 119 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Lig3P97386 Gm13194-201ENSMUST00000142299 311 ntBASIC4.29□□□□□ -1.72
Lig3P97386 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.29□□□□□ -1.72
Lig3P97386 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms