Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb1P63158 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb1P63158 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb1P63158 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
Hmgb1P63158 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb1P63158 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Hmgb1P63158 Gm43844-201ENSMUST00000202926 5605 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm25096-201ENSMUST00000104043 129 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm16082-201ENSMUST00000115992 377 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm12571-201ENSMUST00000118132 243 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm15916-201ENSMUST00000118355 736 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm11430-201ENSMUST00000121317 217 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm8840-201ENSMUST00000122454 386 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm25902-201ENSMUST00000158493 318 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm7335-201ENSMUST00000172475 373 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5□□□□□ -1.61
Hmgb1P63158 Gm27849-201ENSMUST00000183673 125 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Mir7653-201ENSMUST00000184358 61 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC5□□□□□ -1.61
Hmgb1P63158 Gm19498-201ENSMUST00000191128 331 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm37692-201ENSMUST00000192633 232 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm44474-201ENSMUST00000196525 127 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm18691-201ENSMUST00000203593 872 ntBASIC5□□□□□ -1.61
Hmgb1P63158 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5□□□□□ -1.61
Hmgb1P63158 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5□□□□□ -1.61
Hmgb1P63158 AC156832.3-201ENSMUST00000215591 435 ntBASIC5□□□□□ -1.61
Hmgb1P63158 AC153800.1-201ENSMUST00000219212 365 ntBASIC5□□□□□ -1.61
Hmgb1P63158 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC5□□□□□ -1.61
Hmgb1P63158 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Hmgb1P63158 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Hmgb1P63158 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5□□□□□ -1.61
Hmgb1P63158 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm11490-201ENSMUST00000118128 272 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm11321-201ENSMUST00000121257 902 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm22059-201ENSMUST00000157544 104 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm22968-201ENSMUST00000157955 118 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm26988-201ENSMUST00000183296 945 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm44212-201ENSMUST00000205016 897 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm17779-201ENSMUST00000213395 394 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb1P63158 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 AC192334.2-201ENSMUST00000223087 1091 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Hmgb1P63158 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Hmgb1P63158 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.99□□□□□ -1.61
Hmgb1P63158 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb1P63158 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm13386-201ENSMUST00000117677 124 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm24113-201ENSMUST00000157477 276 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm24689-201ENSMUST00000157760 104 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm23317-201ENSMUST00000157999 129 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm20450-201ENSMUST00000173652 147 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm3454-201ENSMUST00000185571 412 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm28061-201ENSMUST00000189085 807 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm2053-201ENSMUST00000195671 631 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm43309-201ENSMUST00000200837 458 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb1P63158 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.98□□□□□ -1.61
Hmgb1P63158 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm25581-201ENSMUST00000083410 164 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Mir21a-201ENSMUST00000083521 92 ntBASIC4.98□□□□□ -1.61
Hmgb1P63158 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hmgb1P63158 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms