Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm3442-201ENSMUST00000216808 710 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Ear14-201ENSMUST00000049559 468 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.79□□□□□ -1.64
Shmt1P50431 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Shmt1P50431 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Shmt1P50431 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Shmt1P50431 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Fus-202ENSMUST00000079045 2623 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Shmt1P50431 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Shmt1P50431 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Shmt1P50431 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm25563-201ENSMUST00000104603 74 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Shmt1P50431 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Shmt1P50431 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm15399-201ENSMUST00000118055 724 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm7429-201ENSMUST00000118664 348 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm9078-201ENSMUST00000119126 617 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm13627-201ENSMUST00000119700 706 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm13009-201ENSMUST00000121307 267 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm14362-201ENSMUST00000121679 273 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm15254-201ENSMUST00000149567 273 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm6214-201ENSMUST00000178845 541 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm2092-201ENSMUST00000178887 639 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm2759-201ENSMUST00000179938 639 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Mir6933-201ENSMUST00000184982 81 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm4734-201ENSMUST00000200117 777 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm44149-201ENSMUST00000204256 226 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm44002-201ENSMUST00000205134 594 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm7807-201ENSMUST00000212475 578 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Shmt1P50431 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm25699-201ENSMUST00000082896 167 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm24268-201ENSMUST00000082990 110 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm24446-201ENSMUST00000083982 156 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Shmt1P50431 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Shmt1P50431 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Shmt1P50431 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.78□□□□□ -1.64
Shmt1P50431 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Shmt1P50431 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Shmt1P50431 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Shmt1P50431 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Mir92b-201ENSMUST00000102300 83 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm25097-201ENSMUST00000104042 145 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm25726-201ENSMUST00000104529 129 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm15603-201ENSMUST00000119252 492 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm7855-201ENSMUST00000137737 687 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm16250-201ENSMUST00000148974 256 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Shmt1P50431 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm24418-201ENSMUST00000177597 79 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm24639-201ENSMUST00000178518 79 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm23076-201ENSMUST00000179082 79 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm25077-201ENSMUST00000179157 79 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Mir6960-201ENSMUST00000183449 61 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.77□□□□□ -1.65
Shmt1P50431 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.77□□□□□ -1.65
Shmt1P50431 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.77□□□□□ -1.65
Shmt1P50431 Gm7034-201ENSMUST00000218638 645 ntBASIC4.77□□□□□ -1.65
Shmt1P50431 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms