Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.81□□□□□ -1.64
Ercc3P49135 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm5757-201ENSMUST00000117494 528 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13678-201ENSMUST00000118926 340 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm14714-201ENSMUST00000119743 439 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13687-201ENSMUST00000119857 282 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm15529-201ENSMUST00000121833 994 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm22204-201ENSMUST00000122654 327 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm38061-201ENSMUST00000192490 365 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm32300-201ENSMUST00000221735 515 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Ercc3P49135 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.81□□□□□ -1.64
Ercc3P49135 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ercc3P49135 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ercc3P49135 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ercc3P49135 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ercc3P49135 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.81□□□□□ -1.64
Ercc3P49135 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Ercc3P49135 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Ercc3P49135 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm7429-201ENSMUST00000118664 348 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm11262-201ENSMUST00000119326 833 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm22986-201ENSMUST00000122753 130 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm23228-201ENSMUST00000157296 270 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm23312-201ENSMUST00000158774 102 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.8□□□□□ -1.64
Ercc3P49135 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm23215-201ENSMUST00000178153 121 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm5473-201ENSMUST00000179326 642 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Gm28925-201ENSMUST00000188586 168 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm29598-201ENSMUST00000188996 588 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm29389-201ENSMUST00000191562 352 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm20162-201ENSMUST00000193629 871 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm43070-201ENSMUST00000196938 415 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm43853-201ENSMUST00000197162 301 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm42451-201ENSMUST00000197410 244 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm45735-201ENSMUST00000212779 319 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Gm5548-201ENSMUST00000055878 397 ntBASIC4.8□□□□□ -1.64
Ercc3P49135 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ercc3P49135 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Ercc3P49135 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
Ercc3P49135 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.8□□□□□ -1.64
Ercc3P49135 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.8□□□□□ -1.64
Ercc3P49135 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ercc3P49135 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm13567-201ENSMUST00000118026 247 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Mup-ps14-201ENSMUST00000118437 532 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Mup-ps10-201ENSMUST00000119626 556 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm6373-201ENSMUST00000121026 360 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm25177-201ENSMUST00000122634 117 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm14651-201ENSMUST00000147192 442 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm25413-201ENSMUST00000158544 312 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ercc3P49135 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm22307-201ENSMUST00000180019 107 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm27952-201ENSMUST00000184748 105 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm28412-201ENSMUST00000187243 177 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.79□□□□□ -1.64
Ercc3P49135 Ighv1-41-201ENSMUST00000194414 329 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm9722-201ENSMUST00000194568 802 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm43848-201ENSMUST00000198060 1247 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 Gm20039-201ENSMUST00000210329 394 ntBASIC4.79□□□□□ -1.64
Ercc3P49135 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ercc3P49135 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms