Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm24784-201ENSMUST00000157640 62 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm24537-201ENSMUST00000157950 102 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm27960-201ENSMUST00000183445 184 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm24949-201ENSMUST00000183609 215 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm27490-201ENSMUST00000184754 128 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm28769-201ENSMUST00000190176 615 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.92□□□□□ -1.46
Rfx1P48377 Gm44041-201ENSMUST00000203678 396 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm44870-201ENSMUST00000207291 357 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Gm18442-201ENSMUST00000220925 639 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Rfx1P48377 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Rfx1P48377 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.92□□□□□ -1.46
Rfx1P48377 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Rfx1P48377 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm23746-201ENSMUST00000104229 125 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm24889-201ENSMUST00000104388 132 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm12683-201ENSMUST00000117528 415 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm9059-201ENSMUST00000118319 183 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm15357-201ENSMUST00000119160 285 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm7219-201ENSMUST00000119619 297 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm23965-201ENSMUST00000157969 142 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm25243-201ENSMUST00000174912 207 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm24520-201ENSMUST00000179510 110 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm29228-201ENSMUST00000185489 418 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm42459-201ENSMUST00000199679 742 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm5023-201ENSMUST00000217442 587 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rfx1P48377 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Gm26163-201ENSMUST00000083792 178 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Rfx1P48377 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rfx1P48377 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Rfx1P48377 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rfx1P48377 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.91□□□□□ -1.46
Rfx1P48377 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.91□□□□□ -1.46
Rfx1P48377 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm14355-201ENSMUST00000117352 264 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm14880-201ENSMUST00000117581 292 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm8129-201ENSMUST00000118230 213 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm15428-201ENSMUST00000121352 333 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm14333-201ENSMUST00000130484 264 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm25339-201ENSMUST00000157458 232 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm23669-201ENSMUST00000157470 128 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm24940-201ENSMUST00000158326 108 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm43794-201ENSMUST00000200971 692 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm32453-201ENSMUST00000204183 456 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm32536-201ENSMUST00000205209 445 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm8158-201ENSMUST00000219220 465 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm8249-201ENSMUST00000219225 465 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 Gm8112-201ENSMUST00000219637 465 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.9□□□□□ -1.46
Rfx1P48377 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Rfx1P48377 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rfx1P48377 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms