Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HttP42859 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HttP42859 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HttP42859 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HttP42859 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HttP42859 Gm24120-201ENSMUST00000103978 129 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm25466-201ENSMUST00000103995 132 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm12954-201ENSMUST00000118610 611 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm13555-201ENSMUST00000121668 319 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm28625-201ENSMUST00000188309 205 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm45380-201ENSMUST00000210465 315 ntBASIC3.06□□□□□ -1.92
HttP42859 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.06□□□□□ -1.92
HttP42859 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.06□□□□□ -1.92
HttP42859 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.06□□□□□ -1.92
HttP42859 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HttP42859 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.06□□□□□ -1.92
HttP42859 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm14593-201ENSMUST00000119948 294 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm45006-201ENSMUST00000206078 690 ntBASIC3.06□□□□□ -1.92
HttP42859 Mir184-201ENSMUST00000083662 69 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm24446-201ENSMUST00000083982 156 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm20342-201ENSMUST00000185480 9720 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HttP42859 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HttP42859 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HttP42859 Gm15021-201ENSMUST00000117832 742 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm15536-201ENSMUST00000121411 114 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm22859-201ENSMUST00000174978 122 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.06□□□□□ -1.92
HttP42859 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm43651-201ENSMUST00000199796 439 ntBASIC3.06□□□□□ -1.92
HttP42859 Gm46996-201ENSMUST00000220924 408 ntBASIC3.06□□□□□ -1.92
HttP42859 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HttP42859 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HttP42859 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HttP42859 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HttP42859 Mir7225-201ENSMUST00000184178 54 ntBASIC3.05□□□□□ -1.92
HttP42859 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.05□□□□□ -1.92
HttP42859 Gm6361-201ENSMUST00000091031 435 ntBASIC3.05□□□□□ -1.92
HttP42859 Gm26015-201ENSMUST00000104402 125 ntBASIC3.05□□□□□ -1.92
HttP42859 Gm13009-201ENSMUST00000121307 267 ntBASIC3.05□□□□□ -1.92
HttP42859 Gm24379-201ENSMUST00000122695 86 ntBASIC3.05□□□□□ -1.92
HttP42859 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HttP42859 Mir7039-201ENSMUST00000183852 85 ntBASIC3.05□□□□□ -1.92
HttP42859 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HttP42859 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HttP42859 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HttP42859 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
HttP42859 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
HttP42859 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
HttP42859 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HttP42859 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HttP42859 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HttP42859 Gm13439-201ENSMUST00000117541 409 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm27445-201ENSMUST00000184484 72 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm28466-201ENSMUST00000190678 659 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm43765-201ENSMUST00000196303 893 ntBASIC3.04□□□□□ -1.92
HttP42859 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm43478-201ENSMUST00000200381 292 ntBASIC3.04□□□□□ -1.92
HttP42859 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.04□□□□□ -1.92
HttP42859 Diaph3-206ENSMUST00000226745 713 ntBASIC3.04□□□□□ -1.92
HttP42859 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HttP42859 Gm38248-201ENSMUST00000193744 5783 ntBASIC3.04□□□□□ -1.92
HttP42859 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HttP42859 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HttP42859 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC3.04□□□□□ -1.92
HttP42859 Gm22534-201ENSMUST00000158173 104 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm24949-201ENSMUST00000183609 215 ntBASIC3.04□□□□□ -1.92
HttP42859 Mir6997-201ENSMUST00000184313 71 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm42428-201ENSMUST00000198677 302 ntBASIC3.04□□□□□ -1.92
HttP42859 AC153954.2-201ENSMUST00000213811 287 ntBASIC3.04□□□□□ -1.92
HttP42859 AC133283.1-201ENSMUST00000228443 859 ntBASIC3.04□□□□□ -1.92
HttP42859 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HttP42859 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HttP42859 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.04□□□□□ -1.92
HttP42859 Gm23268-201ENSMUST00000175494 78 ntBASIC3.04□□□□□ -1.92
HttP42859 Snord93-201ENSMUST00000175580 71 ntBASIC3.04□□□□□ -1.92
HttP42859 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HttP42859 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HttP42859 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HttP42859 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.03□□□□□ -1.92
HttP42859 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HttP42859 Gm26396-201ENSMUST00000104093 132 ntBASIC3.03□□□□□ -1.92
HttP42859 Gm43704-201ENSMUST00000196164 496 ntBASIC3.03□□□□□ -1.92
HttP42859 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HttP42859 Mir127-201ENSMUST00000093568 70 ntBASIC3.03□□□□□ -1.92
HttP42859 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HttP42859 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HttP42859 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HttP42859 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HttP42859 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
HttP42859 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.03□□□□□ -1.92
HttP42859 Gm17072-201ENSMUST00000166673 658 ntBASIC3.03□□□□□ -1.92
HttP42859 Gm17989-201ENSMUST00000211543 412 ntBASIC3.03□□□□□ -1.92
HttP42859 AV026068-237ENSMUST00000226075 572 ntBASIC3.03□□□□□ -1.92
HttP42859 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HttP42859 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HttP42859 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HttP42859 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms