Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm22019-201ENSMUST00000104359 96 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm23532-201ENSMUST00000104569 112 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sox6P40645 Gm13228-201ENSMUST00000118937 634 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm11704-201ENSMUST00000120031 214 ntBASIC3.3□□□□□ -1.88
Sox6P40645 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm24244-201ENSMUST00000157317 130 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm24745-201ENSMUST00000157840 85 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sox6P40645 Gm18415-201ENSMUST00000177464 647 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sox6P40645 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm9541-201ENSMUST00000188409 502 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm36934-201ENSMUST00000192007 306 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm20177-201ENSMUST00000203705 334 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm44611-201ENSMUST00000207507 355 ntBASIC3.3□□□□□ -1.88
Sox6P40645 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.3□□□□□ -1.88
Sox6P40645 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm26121-201ENSMUST00000083364 162 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox6P40645 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox6P40645 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox6P40645 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Sox6P40645 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Sox6P40645 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Sox6P40645 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.3□□□□□ -1.88
Sox6P40645 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.29□□□□□ -1.88
Sox6P40645 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sox6P40645 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm12090-201ENSMUST00000118692 758 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm14577-201ENSMUST00000121134 256 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm16359-201ENSMUST00000124511 289 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.29□□□□□ -1.88
Sox6P40645 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.29□□□□□ -1.88
Sox6P40645 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.29□□□□□ -1.88
Sox6P40645 Gm22840-201ENSMUST00000158444 136 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Sox6P40645 Gm27648-201ENSMUST00000184315 107 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm37617-201ENSMUST00000194309 159 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm37495-201ENSMUST00000194590 264 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.29□□□□□ -1.88
Sox6P40645 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.29□□□□□ -1.88
Sox6P40645 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Sox6P40645 Mir325-201ENSMUST00000083491 98 ntBASIC3.29□□□□□ -1.88
Sox6P40645 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sox6P40645 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sox6P40645 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Sox6P40645 Mir804-201ENSMUST00000103251 95 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm12568-201ENSMUST00000117362 624 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm14591-201ENSMUST00000120407 518 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm16005-201ENSMUST00000120515 269 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.28□□□□□ -1.88
Sox6P40645 Gm24059-201ENSMUST00000157493 312 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm25438-201ENSMUST00000158281 110 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm24002-201ENSMUST00000158456 104 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sox6P40645 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sox6P40645 Gm27477-201ENSMUST00000184649 143 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.28□□□□□ -1.88
Sox6P40645 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.28□□□□□ -1.88
Sox6P40645 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.28□□□□□ -1.88
Sox6P40645 Gm38098-201ENSMUST00000194115 241 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Gm29704-201ENSMUST00000196011 253 ntBASIC3.28□□□□□ -1.88
Sox6P40645 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.28□□□□□ -1.88
Sox6P40645 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.28□□□□□ -1.88
Sox6P40645 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.28□□□□□ -1.88
Sox6P40645 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sox6P40645 LOC667541-201ENSMUST00000223408 278 ntBASIC3.28□□□□□ -1.88
Sox6P40645 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.28□□□□□ -1.88
Sox6P40645 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sox6P40645 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sox6P40645 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sox6P40645 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sox6P40645 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms