Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Cxcl12P40224 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cxcl12P40224 Snora81-201ENSMUST00000157310 178 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm22722-201ENSMUST00000157467 132 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm22833-201ENSMUST00000158292 132 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm17187-201ENSMUST00000164622 410 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm4207-201ENSMUST00000173144 960 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm29492-201ENSMUST00000187124 457 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm36985-201ENSMUST00000195595 379 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm24350-202ENSMUST00000198309 132 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm42850-201ENSMUST00000202094 201 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm19726-201ENSMUST00000205008 240 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.43□□□□□ -1.86
Cxcl12P40224 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cxcl12P40224 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm4945-201ENSMUST00000075152 453 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm22979-201ENSMUST00000082609 159 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm25004-201ENSMUST00000083811 161 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.43□□□□□ -1.86
Cxcl12P40224 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cxcl12P40224 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cxcl12P40224 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cxcl12P40224 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.42□□□□□ -1.86
Cxcl12P40224 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Cxcl12P40224 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm15019-201ENSMUST00000120148 434 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm23585-201ENSMUST00000157656 102 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm26028-201ENSMUST00000158660 294 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.42□□□□□ -1.86
Cxcl12P40224 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cxcl12P40224 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cxcl12P40224 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cxcl12P40224 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cxcl12P40224 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.42□□□□□ -1.86
Cxcl12P40224 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cxcl12P40224 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Cxcl12P40224 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm14518-201ENSMUST00000117351 542 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm14901-201ENSMUST00000119001 283 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm15142-201ENSMUST00000121013 856 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm22322-201ENSMUST00000157151 111 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm37111-201ENSMUST00000193250 634 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.41□□□□□ -1.86
Cxcl12P40224 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm44817-201ENSMUST00000205416 453 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm45710-201ENSMUST00000212847 215 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm19181-201ENSMUST00000218891 940 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.41□□□□□ -1.86
Cxcl12P40224 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Defa-ps18-201ENSMUST00000098889 371 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cxcl12P40224 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Cxcl12P40224 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.4□□□□□ -1.86
Cxcl12P40224 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Cxcl12P40224 Gm13761-201ENSMUST00000117238 807 ntBASIC3.4□□□□□ -1.87
Cxcl12P40224 Gm11433-201ENSMUST00000118318 228 ntBASIC3.4□□□□□ -1.87
Cxcl12P40224 Gm9119-201ENSMUST00000118866 495 ntBASIC3.4□□□□□ -1.87
Cxcl12P40224 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms