Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Traf1P39428 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Traf1P39428 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Traf1P39428 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Traf1P39428 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Traf1P39428 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Traf1P39428 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.42□□□□□ -1.7
Traf1P39428 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Traf1P39428 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Traf1P39428 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm13379-201ENSMUST00000118053 621 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm15387-201ENSMUST00000120421 648 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm25105-201ENSMUST00000122477 130 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Gm24014-201ENSMUST00000157728 157 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm22840-201ENSMUST00000158444 136 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm23387-201ENSMUST00000158586 107 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm28438-201ENSMUST00000188299 345 ntBASIC4.41□□□□□ -1.7
Traf1P39428 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.41□□□□□ -1.7
Traf1P39428 Gm37164-201ENSMUST00000192809 637 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm17781-201ENSMUST00000195232 649 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.41□□□□□ -1.7
Traf1P39428 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.41□□□□□ -1.7
Traf1P39428 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.41□□□□□ -1.7
Traf1P39428 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Traf1P39428 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Traf1P39428 Gm5518-201ENSMUST00000084171 648 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Traf1P39428 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.41□□□□□ -1.7
Traf1P39428 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Traf1P39428 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Traf1P39428 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Traf1P39428 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Traf1P39428 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.4□□□□□ -1.7
Traf1P39428 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
Traf1P39428 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Traf1P39428 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.4□□□□□ -1.7
Traf1P39428 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Traf1P39428 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Traf1P39428 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.4□□□□□ -1.7
Traf1P39428 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Traf1P39428 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 Gm14119-201ENSMUST00000119511 235 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.4□□□□□ -1.71
Traf1P39428 Gm23231-201ENSMUST00000157299 104 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm22531-201ENSMUST00000158819 140 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm17655-201ENSMUST00000167969 255 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm18397-201ENSMUST00000176704 587 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.4□□□□□ -1.71
Traf1P39428 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 Gm27189-201ENSMUST00000184119 190 ntBASIC4.4□□□□□ -1.71
Traf1P39428 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.4□□□□□ -1.71
Traf1P39428 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC4.4□□□□□ -1.71
Traf1P39428 Trbv8-201ENSMUST00000194020 285 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.4□□□□□ -1.71
Traf1P39428 Gm44343-201ENSMUST00000196702 90 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm7786-201ENSMUST00000210494 436 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm45379-201ENSMUST00000211772 549 ntBASIC4.4□□□□□ -1.71
Traf1P39428 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.4□□□□□ -1.71
Traf1P39428 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.4□□□□□ -1.71
Traf1P39428 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.4□□□□□ -1.71
Traf1P39428 AC155314.1-201ENSMUST00000227624 508 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Traf1P39428 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Traf1P39428 Gm23460-201ENSMUST00000083258 109 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Traf1P39428 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Traf1P39428 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Traf1P39428 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Traf1P39428 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.4□□□□□ -1.71
Traf1P39428 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Traf1P39428 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Traf1P39428 Mir208b-201ENSMUST00000104735 77 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm15108-201ENSMUST00000116160 803 ntBASIC4.39□□□□□ -1.71
Traf1P39428 Gm13831-201ENSMUST00000118764 302 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms