Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
LdlrP35951 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm22656-201ENSMUST00000104199 171 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm14861-201ENSMUST00000119451 455 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm13220-201ENSMUST00000121535 508 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm23023-201ENSMUST00000158767 109 ntBASIC4.6□□□□□ -1.67
LdlrP35951 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm5558-201ENSMUST00000178933 495 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm25284-201ENSMUST00000180345 141 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Mir6238-201ENSMUST00000184140 129 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm28141-201ENSMUST00000186676 342 ntBASIC4.6□□□□□ -1.67
LdlrP35951 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm23925-202ENSMUST00000188429 132 ntBASIC4.6□□□□□ -1.67
LdlrP35951 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm29524-201ENSMUST00000190819 699 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm2077-201ENSMUST00000195017 319 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm19096-201ENSMUST00000209705 766 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm18903-201ENSMUST00000215343 480 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.6□□□□□ -1.67
LdlrP35951 Gm5023-201ENSMUST00000217442 587 ntBASIC4.6□□□□□ -1.67
LdlrP35951 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm23300-201ENSMUST00000082712 125 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm25140-201ENSMUST00000083254 140 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Gm23093-201ENSMUST00000083450 102 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LdlrP35951 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Fus-202ENSMUST00000079045 2623 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
LdlrP35951 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LdlrP35951 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.6□□□□□ -1.67
LdlrP35951 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.6□□□□□ -1.67
LdlrP35951 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.59□□□□□ -1.67
LdlrP35951 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
LdlrP35951 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Gm12285-201ENSMUST00000117347 233 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm14933-201ENSMUST00000118840 481 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm12884-201ENSMUST00000120371 325 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm14605-201ENSMUST00000120599 268 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Clec2f-201ENSMUST00000121051 374 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm5391-201ENSMUST00000121155 613 ntBASIC4.59□□□□□ -1.67
LdlrP35951 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.59□□□□□ -1.67
LdlrP35951 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.59□□□□□ -1.67
LdlrP35951 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LdlrP35951 Gm8121-201ENSMUST00000153583 499 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm24113-201ENSMUST00000157477 276 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm23906-201ENSMUST00000157573 128 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm22534-201ENSMUST00000158173 104 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm23648-201ENSMUST00000180301 107 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm29105-201ENSMUST00000187256 450 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm28097-201ENSMUST00000187333 366 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm5116-201ENSMUST00000187732 463 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm29627-201ENSMUST00000187984 463 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm37682-201ENSMUST00000191776 522 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm37881-201ENSMUST00000193001 421 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm43559-201ENSMUST00000198755 466 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm5551-201ENSMUST00000199720 690 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.59□□□□□ -1.67
LdlrP35951 Gm6929-201ENSMUST00000210930 468 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
LdlrP35951 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.59□□□□□ -1.67
LdlrP35951 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.59□□□□□ -1.67
LdlrP35951 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms