Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm26377-201ENSMUST00000102184 108 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm23256-201ENSMUST00000102235 110 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm26140-201ENSMUST00000103807 110 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm24096-201ENSMUST00000103905 110 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Mir467h-201ENSMUST00000116759 121 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm12636-201ENSMUST00000117395 624 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm13213-201ENSMUST00000119668 474 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm2005-201ENSMUST00000120759 542 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm15157-201ENSMUST00000121852 702 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm5353-201ENSMUST00000139800 793 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm25058-201ENSMUST00000157365 128 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm25908-201ENSMUST00000157624 98 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm23123-201ENSMUST00000157648 144 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm24727-201ENSMUST00000158231 144 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm3191-201ENSMUST00000167139 346 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.16□□□□□ -1.9
Rom1P32958 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm22908-201ENSMUST00000177620 110 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm14527-201ENSMUST00000179300 639 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.16□□□□□ -1.9
Rom1P32958 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm8600-201ENSMUST00000186320 905 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm29196-201ENSMUST00000189239 618 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm37709-201ENSMUST00000195074 600 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm17781-201ENSMUST00000195232 649 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm4644-201ENSMUST00000197587 400 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.16□□□□□ -1.9
Rom1P32958 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm45380-201ENSMUST00000210465 315 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm6929-201ENSMUST00000210930 468 ntBASIC3.16□□□□□ -1.9
Rom1P32958 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Gm45742-201ENSMUST00000212400 433 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Rom1P32958 AC157085.1-201ENSMUST00000216343 162 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.16□□□□□ -1.9
Rom1P32958 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.16□□□□□ -1.9
Rom1P32958 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.16□□□□□ -1.9
Rom1P32958 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rom1P32958 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm10038-201ENSMUST00000077233 441 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Gm24622-201ENSMUST00000082619 162 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.16□□□□□ -1.9
Rom1P32958 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.16□□□□□ -1.9
Rom1P32958 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rom1P32958 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.16□□□□□ -1.9
Rom1P32958 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Rom1P32958 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.15□□□□□ -1.9
Rom1P32958 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Rom1P32958 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm22473-201ENSMUST00000104114 132 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm22899-201ENSMUST00000104540 131 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Rom1P32958 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm14932-201ENSMUST00000117112 453 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rom1P32958 Gm13640-201ENSMUST00000118445 264 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rom1P32958 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm1866-201ENSMUST00000120701 477 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm22870-201ENSMUST00000157501 112 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm23473-201ENSMUST00000158883 116 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm6900-201ENSMUST00000178971 342 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.91
Rom1P32958 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm8604-201ENSMUST00000183150 965 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.15□□□□□ -1.91
Rom1P32958 Mir6903-201ENSMUST00000183597 88 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.15□□□□□ -1.91
Rom1P32958 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.15□□□□□ -1.91
Rom1P32958 Gm28412-201ENSMUST00000187243 177 ntBASIC3.15□□□□□ -1.91
Rom1P32958 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms