Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.22□□□□□ -1.89
P20040 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.22□□□□□ -1.89
P20040 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
P20040 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
P20040 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
P20040 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.21□□□□□ -1.89
P20040 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
P20040 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
P20040 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
P20040 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.21□□□□□ -1.9
P20040 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.21□□□□□ -1.9
P20040 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Gm11372-201ENSMUST00000117348 570 ntBASIC3.21□□□□□ -1.9
P20040 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.21□□□□□ -1.9
P20040 Gm14554-201ENSMUST00000119548 661 ntBASIC3.21□□□□□ -1.9
P20040 Gm11600-201ENSMUST00000119592 240 ntBASIC3.21□□□□□ -1.9
P20040 Gm12873-201ENSMUST00000119988 422 ntBASIC3.21□□□□□ -1.9
P20040 Gm16458-201ENSMUST00000121428 502 ntBASIC3.21□□□□□ -1.9
P20040 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Gm23257-201ENSMUST00000158322 132 ntBASIC3.21□□□□□ -1.9
P20040 Gm22531-201ENSMUST00000158819 140 ntBASIC3.21□□□□□ -1.9
P20040 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.21□□□□□ -1.9
P20040 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.21□□□□□ -1.9
P20040 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.21□□□□□ -1.9
P20040 Gm37431-201ENSMUST00000195102 111 ntBASIC3.21□□□□□ -1.9
P20040 Gm44348-201ENSMUST00000200165 122 ntBASIC3.21□□□□□ -1.9
P20040 Gm44703-201ENSMUST00000205724 248 ntBASIC3.21□□□□□ -1.9
P20040 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
P20040 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.21□□□□□ -1.9
P20040 Gm18598-201ENSMUST00000207724 597 ntBASIC3.21□□□□□ -1.9
P20040 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.21□□□□□ -1.9
P20040 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.21□□□□□ -1.9
P20040 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
P20040 Gm25699-201ENSMUST00000082896 167 ntBASIC3.21□□□□□ -1.9
P20040 Gm10704-201ENSMUST00000098952 730 ntBASIC3.21□□□□□ -1.9
P20040 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.21□□□□□ -1.9
P20040 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
P20040 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
P20040 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
P20040 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.21□□□□□ -1.9
P20040 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.21□□□□□ -1.9
P20040 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
P20040 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.2□□□□□ -1.9
P20040 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
P20040 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.2□□□□□ -1.9
P20040 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
P20040 Gm26075-201ENSMUST00000104062 121 ntBASIC3.2□□□□□ -1.9
P20040 Gm25420-201ENSMUST00000104216 127 ntBASIC3.2□□□□□ -1.9
P20040 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
P20040 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.2□□□□□ -1.9
P20040 Gm15268-201ENSMUST00000118845 352 ntBASIC3.2□□□□□ -1.9
P20040 Gm13273-201ENSMUST00000119737 159 ntBASIC3.2□□□□□ -1.9
P20040 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.2□□□□□ -1.9
P20040 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Gm23540-201ENSMUST00000157543 164 ntBASIC3.2□□□□□ -1.9
P20040 Gm22890-201ENSMUST00000158642 144 ntBASIC3.2□□□□□ -1.9
P20040 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.2□□□□□ -1.9
P20040 Gm25817-201ENSMUST00000177758 121 ntBASIC3.2□□□□□ -1.9
P20040 Gm24766-201ENSMUST00000179182 121 ntBASIC3.2□□□□□ -1.9
P20040 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.2□□□□□ -1.9
P20040 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.2□□□□□ -1.9
P20040 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.2□□□□□ -1.9
P20040 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.2□□□□□ -1.9
P20040 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.2□□□□□ -1.9
P20040 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.2□□□□□ -1.9
P20040 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.2□□□□□ -1.9
P20040 Gm30738-201ENSMUST00000221346 502 ntBASIC3.2□□□□□ -1.9
P20040 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.2□□□□□ -1.9
P20040 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.2□□□□□ -1.9
P20040 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
P20040 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.2□□□□□ -1.9
P20040 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
P20040 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms