Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm43586-201ENSMUST00000195948 310 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm43967-201ENSMUST00000203787 301 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm9712-201ENSMUST00000210842 311 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm45588-201ENSMUST00000211213 630 ntBASIC3.93□□□□□ -1.78
Lire1P11260 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm18903-201ENSMUST00000215343 480 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm19134-201ENSMUST00000221203 487 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm30738-201ENSMUST00000221346 502 ntBASIC3.93□□□□□ -1.78
Lire1P11260 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Lire1P11260 Snora70-201ENSMUST00000083047 137 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Gm22970-201ENSMUST00000083304 186 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Lire1P11260 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Lire1P11260 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.93□□□□□ -1.78
Lire1P11260 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lire1P11260 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lire1P11260 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Lire1P11260 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lire1P11260 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm14768-201ENSMUST00000122126 678 ntBASIC3.92□□□□□ -1.78
Lire1P11260 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm25902-201ENSMUST00000158493 318 ntBASIC3.92□□□□□ -1.78
Lire1P11260 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm37417-201ENSMUST00000195257 454 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm19177-201ENSMUST00000204520 613 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm18320-201ENSMUST00000211304 595 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm17989-201ENSMUST00000211543 412 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm17779-201ENSMUST00000213395 394 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Lire1P11260 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Lire1P11260 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Lire1P11260 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.92□□□□□ -1.78
Lire1P11260 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Lire1P11260 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Lire1P11260 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lire1P11260 Mir599-201ENSMUST00000102378 88 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.91□□□□□ -1.78
Lire1P11260 Gm10444-201ENSMUST00000126708 148 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.91□□□□□ -1.78
Lire1P11260 Gm23053-201ENSMUST00000175136 96 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm26219-201ENSMUST00000175216 71 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Lire1P11260 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lire1P11260 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Lire1P11260 Gm43415-201ENSMUST00000201934 750 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm45072-201ENSMUST00000208673 929 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm45742-201ENSMUST00000212400 433 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Lire1P11260 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Lire1P11260 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm22507-201ENSMUST00000082773 160 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm24928-201ENSMUST00000083399 107 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Gm25897-201ENSMUST00000083709 107 ntBASIC3.91□□□□□ -1.78
Lire1P11260 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lire1P11260 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Lire1P11260 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Lire1P11260 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.91□□□□□ -1.78
Lire1P11260 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Lire1P11260 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Lire1P11260 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Lire1P11260 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Lire1P11260 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Lire1P11260 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Lire1P11260 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lire1P11260 Gm22269-201ENSMUST00000104002 130 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Lire1P11260 Gm12149-201ENSMUST00000117511 654 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm11698-201ENSMUST00000117948 455 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm6584-201ENSMUST00000119671 447 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.9□□□□□ -1.79
Lire1P11260 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lire1P11260 Gm23231-201ENSMUST00000157299 104 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm26349-201ENSMUST00000157530 130 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm23638-201ENSMUST00000175073 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm23158-201ENSMUST00000175076 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm22907-201ENSMUST00000175198 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm22625-201ENSMUST00000175382 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm22875-201ENSMUST00000175449 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm25197-201ENSMUST00000175516 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm27857-201ENSMUST00000176930 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm26268-201ENSMUST00000177685 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm23681-201ENSMUST00000178821 126 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm5473-201ENSMUST00000179326 642 ntBASIC3.9□□□□□ -1.79
Lire1P11260 Gm24969-201ENSMUST00000180331 79 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms