Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Gm7204-201ENSMUST00000062591 600 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Chmp6P0C0A3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Chmp6P0C0A3 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.71□□□□□ -1.81
Chmp6P0C0A3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.81
Chmp6P0C0A3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
Chmp6P0C0A3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
Chmp6P0C0A3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm14739-201ENSMUST00000120424 802 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm23326-201ENSMUST00000157419 105 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm25224-201ENSMUST00000158195 68 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm24553-201ENSMUST00000158653 131 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm25977-201ENSMUST00000158697 85 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm18604-201ENSMUST00000172535 558 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm28654-201ENSMUST00000189801 379 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm5983-201ENSMUST00000197739 770 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm44927-201ENSMUST00000207573 716 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr936-202ENSMUST00000216912 937 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm2710-201ENSMUST00000073196 603 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Mir323-201ENSMUST00000083683 86 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Chmp6P0C0A3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.71□□□□□ -1.82
Chmp6P0C0A3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm9432-201ENSMUST00000117810 759 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm15060-201ENSMUST00000119550 948 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm5392-201ENSMUST00000122189 789 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Mir6408-201ENSMUST00000183643 91 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Chmp6P0C0A3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm23256-201ENSMUST00000102235 110 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm26140-201ENSMUST00000103807 110 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm13167-201ENSMUST00000118554 578 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm14564-201ENSMUST00000122159 294 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm24008-201ENSMUST00000157733 138 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm22908-201ENSMUST00000177620 110 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm27760-201ENSMUST00000185048 114 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.69□□□□□ -1.82
Chmp6P0C0A3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms