Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25655-201ENSMUST00000158465 290 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm24767-201ENSMUST00000158509 95 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm16545-201ENSMUST00000161968 463 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm5430-201ENSMUST00000182525 915 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Mir195b-201ENSMUST00000184814 97 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm7329-201ENSMUST00000185915 210 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm29597-201ENSMUST00000188035 308 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm37089-201ENSMUST00000195616 129 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm43116-201ENSMUST00000199789 195 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm44533-201ENSMUST00000207782 268 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm39197-201ENSMUST00000212069 457 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 CT485607.3-201ENSMUST00000213361 672 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 AW046200-203ENSMUST00000211787 2479 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Hoxd3P09027 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
Hoxd3P09027 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.64□□□□□ -1.67
Hoxd3P09027 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm37894-201ENSMUST00000195416 2599 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm37435-201ENSMUST00000192078 3947 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm38299-201ENSMUST00000193214 3789 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm11486-201ENSMUST00000107322 478 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm12820-201ENSMUST00000119233 342 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm6175-201ENSMUST00000121351 400 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm11909-201ENSMUST00000121424 759 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm14581-201ENSMUST00000121726 198 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Snora47-201ENSMUST00000157483 138 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm24719-201ENSMUST00000157520 110 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm22059-201ENSMUST00000157544 104 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm22328-201ENSMUST00000158074 112 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm26169-201ENSMUST00000158420 135 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm23408-201ENSMUST00000158523 265 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm26022-201ENSMUST00000158663 108 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm17052-201ENSMUST00000165496 289 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm37609-201ENSMUST00000191778 678 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm38080-201ENSMUST00000194035 268 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm42459-201ENSMUST00000199679 742 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm4510-201ENSMUST00000218265 427 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC4.63□□□□□ -1.67
Hoxd3P09027 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm5321-201ENSMUST00000072050 447 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Hoxd3P09027 Gm8401-201ENSMUST00000120248 1739 ntBASIC4.63□□□□□ -1.67
Hoxd3P09027 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms