Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col3a1P08121 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col3a1P08121 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Col3a1P08121 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Col3a1P08121 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Col3a1P08121 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.27□□□□□ -1.73
Col3a1P08121 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col3a1P08121 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col3a1P08121 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Col3a1P08121 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm15125-201ENSMUST00000116185 800 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm26100-201ENSMUST00000157245 127 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm24960-201ENSMUST00000157923 90 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm24854-201ENSMUST00000158025 98 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm8600-201ENSMUST00000186320 905 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm28594-201ENSMUST00000187022 661 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm21742-201ENSMUST00000189352 548 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm37081-201ENSMUST00000192034 196 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm43431-201ENSMUST00000198577 340 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm4987-201ENSMUST00000078326 408 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm24533-201ENSMUST00000083138 196 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 BC055308-201ENSMUST00000193380 2538 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col3a1P08121 Gm37911-201ENSMUST00000193099 1545 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.26□□□□□ -1.73
Col3a1P08121 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.25□□□□□ -1.73
Col3a1P08121 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.25□□□□□ -1.73
Col3a1P08121 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm12025-201ENSMUST00000117768 144 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm6274-201ENSMUST00000118173 797 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm2003-201ENSMUST00000118537 636 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm13873-201ENSMUST00000119208 427 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm14898-201ENSMUST00000120202 645 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm1989-201ENSMUST00000126244 636 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm22555-201ENSMUST00000157801 62 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Samd15-201ENSMUST00000169669 1194 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm37771-201ENSMUST00000193121 265 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm43659-201ENSMUST00000200894 628 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm44961-201ENSMUST00000207450 196 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Gm20948-201ENSMUST00000211091 449 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.25□□□□□ -1.73
Col3a1P08121 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col3a1P08121 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col3a1P08121 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col3a1P08121 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col3a1P08121 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.25□□□□□ -1.73
Col3a1P08121 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col3a1P08121 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Col3a1P08121 Gm24118-201ENSMUST00000103972 126 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Col3a1P08121 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm11420-201ENSMUST00000120047 402 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm12578-201ENSMUST00000121244 417 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm23111-201ENSMUST00000122652 105 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.24□□□□□ -1.73
Col3a1P08121 Gm26045-201ENSMUST00000157862 97 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm27163-201ENSMUST00000184767 409 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm29073-201ENSMUST00000185563 664 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.24□□□□□ -1.73
Col3a1P08121 Gm29165-201ENSMUST00000190655 664 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm29211-201ENSMUST00000191470 664 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm37966-201ENSMUST00000193122 326 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm43308-201ENSMUST00000197236 373 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm4859-201ENSMUST00000199625 787 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.24□□□□□ -1.73
Col3a1P08121 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.24□□□□□ -1.73
Col3a1P08121 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms