Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.31□□□□□ -1.88
P06344 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.31□□□□□ -1.88
P06344 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.31□□□□□ -1.88
P06344 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.31□□□□□ -1.88
P06344 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.31□□□□□ -1.88
P06344 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.31□□□□□ -1.88
P06344 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
P06344 Gm18120-201ENSMUST00000220079 511 ntBASIC3.31□□□□□ -1.88
P06344 Gm8231-201ENSMUST00000221617 783 ntBASIC3.31□□□□□ -1.88
P06344 Gm12582-201ENSMUST00000030555 697 ntBASIC3.31□□□□□ -1.88
P06344 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
P06344 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
P06344 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
P06344 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.31□□□□□ -1.88
P06344 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
P06344 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
P06344 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.31□□□□□ -1.88
P06344 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Gm336-201ENSMUST00000186376 1480 ntBASIC3.3□□□□□ -1.88
P06344 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
P06344 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
P06344 Gm12656-201ENSMUST00000118149 577 ntBASIC3.3□□□□□ -1.88
P06344 Gm6797-201ENSMUST00000119440 512 ntBASIC3.3□□□□□ -1.88
P06344 Gm11830-201ENSMUST00000120175 561 ntBASIC3.3□□□□□ -1.88
P06344 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Gm24244-201ENSMUST00000157317 130 ntBASIC3.3□□□□□ -1.88
P06344 Gm26349-201ENSMUST00000157530 130 ntBASIC3.3□□□□□ -1.88
P06344 Gm22059-201ENSMUST00000157544 104 ntBASIC3.3□□□□□ -1.88
P06344 Gm25555-201ENSMUST00000158078 111 ntBASIC3.3□□□□□ -1.88
P06344 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
P06344 Mir6385-201ENSMUST00000184295 105 ntBASIC3.3□□□□□ -1.88
P06344 Gm28917-201ENSMUST00000187294 237 ntBASIC3.3□□□□□ -1.88
P06344 Gm28766-201ENSMUST00000191086 234 ntBASIC3.3□□□□□ -1.88
P06344 Gm38281-201ENSMUST00000192301 315 ntBASIC3.3□□□□□ -1.88
P06344 Gm37164-201ENSMUST00000192809 637 ntBASIC3.3□□□□□ -1.88
P06344 Gm37111-201ENSMUST00000193250 634 ntBASIC3.3□□□□□ -1.88
P06344 Gm38356-201ENSMUST00000194313 408 ntBASIC3.3□□□□□ -1.88
P06344 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.3□□□□□ -1.88
P06344 Gm43494-201ENSMUST00000197672 388 ntBASIC3.3□□□□□ -1.88
P06344 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 Gm7041-201ENSMUST00000201227 524 ntBASIC3.3□□□□□ -1.88
P06344 Gm44475-201ENSMUST00000204041 424 ntBASIC3.3□□□□□ -1.88
P06344 Gm44092-201ENSMUST00000204470 258 ntBASIC3.3□□□□□ -1.88
P06344 Gm8681-201ENSMUST00000219115 618 ntBASIC3.3□□□□□ -1.88
P06344 Gm4036-201ENSMUST00000220842 626 ntBASIC3.3□□□□□ -1.88
P06344 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.3□□□□□ -1.88
P06344 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.3□□□□□ -1.88
P06344 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.3□□□□□ -1.88
P06344 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
P06344 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.3□□□□□ -1.88
P06344 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.3□□□□□ -1.88
P06344 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
P06344 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
P06344 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.3□□□□□ -1.88
P06344 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
P06344 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.3□□□□□ -1.88
P06344 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.29□□□□□ -1.88
P06344 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
P06344 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.29□□□□□ -1.88
P06344 Gm14795-201ENSMUST00000118461 471 ntBASIC3.29□□□□□ -1.88
P06344 Gm14898-201ENSMUST00000120202 645 ntBASIC3.29□□□□□ -1.88
P06344 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.29□□□□□ -1.88
P06344 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.29□□□□□ -1.88
P06344 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.29□□□□□ -1.88
P06344 Gm17204-201ENSMUST00000167936 478 ntBASIC3.29□□□□□ -1.88
P06344 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.29□□□□□ -1.88
P06344 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
P06344 Gm22776-201ENSMUST00000178634 94 ntBASIC3.29□□□□□ -1.88
P06344 Gm23767-201ENSMUST00000179278 94 ntBASIC3.29□□□□□ -1.88
P06344 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.29□□□□□ -1.88
P06344 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.29□□□□□ -1.88
P06344 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.29□□□□□ -1.88
P06344 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 Gm29038-201ENSMUST00000191543 678 ntBASIC3.29□□□□□ -1.88
P06344 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.29□□□□□ -1.88
P06344 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.29□□□□□ -1.88
P06344 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.29□□□□□ -1.88
P06344 Gm19243-201ENSMUST00000198592 269 ntBASIC3.29□□□□□ -1.88
P06344 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.29□□□□□ -1.88
P06344 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.29□□□□□ -1.88
P06344 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 Gm6112-201ENSMUST00000208037 629 ntBASIC3.29□□□□□ -1.88
P06344 Gm7380-201ENSMUST00000211599 466 ntBASIC3.29□□□□□ -1.88
P06344 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.29□□□□□ -1.88
P06344 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.29□□□□□ -1.88
P06344 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.29□□□□□ -1.88
P06344 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.29□□□□□ -1.88
P06344 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.29□□□□□ -1.88
P06344 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.29□□□□□ -1.88
P06344 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.29□□□□□ -1.88
P06344 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
P06344 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
P06344 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.29□□□□□ -1.88
P06344 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms