Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm12401-201ENSMUST00000118435 228 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm13717-201ENSMUST00000119868 365 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm16533-201ENSMUST00000140035 228 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm24914-201ENSMUST00000157285 313 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Mir1947-201ENSMUST00000158235 85 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm25198-201ENSMUST00000178574 110 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm4479-201ENSMUST00000178807 171 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Mir8096-201ENSMUST00000184526 127 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm27392-201ENSMUST00000185041 101 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm18100-201ENSMUST00000200897 452 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm19177-201ENSMUST00000204520 613 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm3189-201ENSMUST00000205595 832 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm10988-201ENSMUST00000209150 1088 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm17766-201ENSMUST00000209223 442 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC2.6□□□□□ -1.99
Hmgb3O54879 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm45474-201ENSMUST00000209471 408 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm46233-201ENSMUST00000217831 449 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm8249-201ENSMUST00000219225 465 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Gm6841-201ENSMUST00000220602 598 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.6□□□□□ -1.99
Hmgb3O54879 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgb3O54879 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb3O54879 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm22758-201ENSMUST00000102275 96 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm26423-201ENSMUST00000104277 128 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm14786-201ENSMUST00000117127 944 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm14939-201ENSMUST00000120347 680 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm14907-201ENSMUST00000121948 854 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm22026-201ENSMUST00000122735 281 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm26276-201ENSMUST00000157099 109 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm25971-201ENSMUST00000158953 286 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb3O54879 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Mir6405-201ENSMUST00000184584 124 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm27538-201ENSMUST00000185065 294 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm8498-201ENSMUST00000188227 974 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm5268-201ENSMUST00000189212 940 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm5731-201ENSMUST00000190969 481 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm7449-201ENSMUST00000194393 663 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm44076-201ENSMUST00000203072 520 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm18015-201ENSMUST00000214879 316 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm7540-201ENSMUST00000219764 926 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 AC132433.1-201ENSMUST00000221553 1101 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm9628-201ENSMUST00000222169 725 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgb3O54879 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Gm26121-201ENSMUST00000083364 162 ntBASIC2.59□□□□□ -1.99
Hmgb3O54879 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hmgb3O54879 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hmgb3O54879 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Hmgb3O54879 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.59□□□□□ -2
Hmgb3O54879 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.59□□□□□ -2
Hmgb3O54879 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Hmgb3O54879 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -2
Hmgb3O54879 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.59□□□□□ -2
Hmgb3O54879 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.59□□□□□ -2
Hmgb3O54879 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm3940-201ENSMUST00000105087 432 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm14537-201ENSMUST00000117464 599 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm15142-201ENSMUST00000121013 856 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm11582-201ENSMUST00000121041 236 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.58□□□□□ -2
Hmgb3O54879 Gm22226-201ENSMUST00000157355 109 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm24961-201ENSMUST00000157918 184 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm22516-201ENSMUST00000158266 124 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hmgb3O54879 Gm5967-201ENSMUST00000172723 494 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Mir3062-201ENSMUST00000174986 105 ntBASIC2.58□□□□□ -2
Hmgb3O54879 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC2.58□□□□□ -2
Hmgb3O54879 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC2.58□□□□□ -2
Hmgb3O54879 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC2.58□□□□□ -2
Hmgb3O54879 Gm42438-201ENSMUST00000197832 974 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms