Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm16345-201ENSMUST00000146065 158 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm15946-201ENSMUST00000160654 423 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm17086-201ENSMUST00000171346 484 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Mir3062-201ENSMUST00000174986 105 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm23638-201ENSMUST00000175073 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm23158-201ENSMUST00000175076 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm22907-201ENSMUST00000175198 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm22625-201ENSMUST00000175382 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm22875-201ENSMUST00000175449 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm25197-201ENSMUST00000175516 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm22355-201ENSMUST00000175531 96 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm27857-201ENSMUST00000176930 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm26268-201ENSMUST00000177685 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm8221-201ENSMUST00000178052 564 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm23681-201ENSMUST00000178821 126 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm29335-201ENSMUST00000188361 459 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm45031-201ENSMUST00000206800 288 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm7624-201ENSMUST00000209702 435 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm7333-201ENSMUST00000213449 1060 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm20304-201ENSMUST00000218168 444 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Snord15b-201ENSMUST00000083032 145 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shisa8J3QNX5 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm15766-201ENSMUST00000118025 813 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm11346-201ENSMUST00000118346 704 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm25334-201ENSMUST00000158036 110 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm22765-201ENSMUST00000158371 128 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm3531-201ENSMUST00000162698 489 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm26950-201ENSMUST00000182734 498 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm28967-201ENSMUST00000187351 281 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Trbv11-201ENSMUST00000194354 260 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm43954-201ENSMUST00000204634 544 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm45007-201ENSMUST00000206237 366 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm44765-201ENSMUST00000206927 601 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm44611-201ENSMUST00000207507 355 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm44946-201ENSMUST00000208425 572 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm3442-201ENSMUST00000216808 710 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm7034-201ENSMUST00000218638 645 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm23097-201ENSMUST00000083448 105 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Mir31-201ENSMUST00000083474 106 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.91□□□□□ -1.78
Shisa8J3QNX5 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Shisa8J3QNX5 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.9□□□□□ -1.78
Shisa8J3QNX5 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms