Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm15785-201ENSMUST00000119145 694 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Mir6993-201ENSMUST00000184912 65 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm28339-201ENSMUST00000185845 696 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm18921-201ENSMUST00000221798 366 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.2□□□□□ -1.9
Scn1aA2APX8 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Scn1aA2APX8 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm9043-201ENSMUST00000119677 314 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm29038-201ENSMUST00000191543 678 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm37007-201ENSMUST00000194234 319 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm5358-201ENSMUST00000212814 353 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm6373-201ENSMUST00000121026 360 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm4540-201ENSMUST00000170669 429 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm27636-201ENSMUST00000184528 122 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm44703-201ENSMUST00000205724 248 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm19269-201ENSMUST00000211401 804 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm21112-201ENSMUST00000212224 578 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm7760-201ENSMUST00000212265 578 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn1aA2APX8 Mir184-201ENSMUST00000083662 69 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 AF357428-201ENSMUST00000083815 69 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.19□□□□□ -1.9
Scn1aA2APX8 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm15933-201ENSMUST00000117215 616 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm5754-201ENSMUST00000118774 892 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm12358-201ENSMUST00000121842 520 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm43765-201ENSMUST00000196303 893 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm43478-201ENSMUST00000200381 292 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn1aA2APX8 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Gm22005-201ENSMUST00000082795 141 ntBASIC3.18□□□□□ -1.9
Scn1aA2APX8 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn1aA2APX8 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm15780-201ENSMUST00000121283 935 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm24213-201ENSMUST00000158255 258 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm14527-201ENSMUST00000179300 639 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm44865-201ENSMUST00000207240 531 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm5176-201ENSMUST00000218244 1227 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 LOC667541-201ENSMUST00000223408 278 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm16471-201ENSMUST00000121940 618 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm23391-201ENSMUST00000157579 104 ntBASIC3.17□□□□□ -1.9
Scn1aA2APX8 Gm6374-201ENSMUST00000159051 788 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms