Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Mir215-201ENSMUST00000083628 112 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Gm22829-201ENSMUST00000083771 106 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
H2afb3S4R1G7 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.06□□□□□ -1.76
H2afb3S4R1G7 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm25096-201ENSMUST00000104043 129 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm23133-201ENSMUST00000104255 135 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm12386-201ENSMUST00000117380 688 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm13785-201ENSMUST00000119099 690 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm14731-201ENSMUST00000119216 376 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm15926-201ENSMUST00000120492 550 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm12900-201ENSMUST00000120919 573 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Mir1898-201ENSMUST00000122643 83 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm24751-201ENSMUST00000157844 102 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm24636-201ENSMUST00000158673 288 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Mir7093-201ENSMUST00000184195 101 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm37399-201ENSMUST00000195224 416 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm37119-201ENSMUST00000195691 389 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm7786-201ENSMUST00000210494 436 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm7128-201ENSMUST00000211639 533 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Snord15b-201ENSMUST00000083032 145 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
H2afb3S4R1G7 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Mir883a-201ENSMUST00000104824 76 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm13386-201ENSMUST00000117677 124 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm14815-201ENSMUST00000120060 488 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm9225-201ENSMUST00000121921 836 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm23118-201ENSMUST00000122657 187 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm5258-201ENSMUST00000165437 327 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm6214-201ENSMUST00000178845 541 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Mir6951-201ENSMUST00000183910 75 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm10193-201ENSMUST00000188288 231 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm18971-201ENSMUST00000197240 374 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm44054-201ENSMUST00000203814 372 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm10264-201ENSMUST00000220589 429 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm46996-201ENSMUST00000220924 408 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm18442-201ENSMUST00000220925 639 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm23626-201ENSMUST00000082458 133 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
H2afb3S4R1G7 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
H2afb3S4R1G7 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms