Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Cldn9Q9Z0S7 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Mir804-201ENSMUST00000103251 95 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm24403-201ENSMUST00000104616 130 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm14142-201ENSMUST00000117833 296 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm13122-201ENSMUST00000118380 453 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm15014-201ENSMUST00000120742 258 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm15799-201ENSMUST00000120899 289 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm14800-201ENSMUST00000122084 1272 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm22208-201ENSMUST00000122658 110 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm23602-201ENSMUST00000157258 132 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm26487-201ENSMUST00000158022 94 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm15974-201ENSMUST00000159103 531 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm27773-201ENSMUST00000184087 78 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm7897-201ENSMUST00000193981 554 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm44355-201ENSMUST00000200417 104 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm9375-201ENSMUST00000208899 903 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm5176-202ENSMUST00000220267 583 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cldn9Q9Z0S7 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm25097-201ENSMUST00000104042 145 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm15783-201ENSMUST00000117521 633 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm9157-201ENSMUST00000117673 225 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm27538-201ENSMUST00000185065 294 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm3933-201ENSMUST00000195391 439 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm9379-201ENSMUST00000196790 646 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm42438-201ENSMUST00000197832 974 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Trdv3-201ENSMUST00000198551 309 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm43975-201ENSMUST00000203023 481 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm44703-201ENSMUST00000205724 248 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm7119-201ENSMUST00000221345 695 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm22005-201ENSMUST00000082795 141 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cldn9Q9Z0S7 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm14687-201ENSMUST00000120206 363 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm16100-201ENSMUST00000120489 231 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm14577-201ENSMUST00000121134 256 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm23755-201ENSMUST00000157578 343 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm23152-201ENSMUST00000175322 116 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm22111-201ENSMUST00000178010 79 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Gm23687-201ENSMUST00000178664 79 ntBASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Cldn9Q9Z0S7 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms