Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm37007-201ENSMUST00000194234 319 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm6373-201ENSMUST00000121026 360 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm14463-201ENSMUST00000121117 498 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm24190-201ENSMUST00000157976 216 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm18522-201ENSMUST00000173947 650 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm27535-201ENSMUST00000183814 157 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm7870-201ENSMUST00000184467 616 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm43232-201ENSMUST00000201346 364 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn8aQ9WTU3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn8aQ9WTU3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm23063-201ENSMUST00000102350 93 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Mir466i-201ENSMUST00000116924 121 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm7421-201ENSMUST00000119298 639 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm7365-201ENSMUST00000120877 639 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm23402-201ENSMUST00000178130 107 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm28628-201ENSMUST00000187006 264 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm28629-201ENSMUST00000187309 263 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm20162-201ENSMUST00000193629 871 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm21112-201ENSMUST00000212224 578 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm7760-201ENSMUST00000212265 578 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 AC131100.2-201ENSMUST00000227701 998 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.09□□□□□ -1.91
Scn8aQ9WTU3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Gm15933-201ENSMUST00000117215 616 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Gm16021-201ENSMUST00000121176 219 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Gm25843-201ENSMUST00000122582 314 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Gm28974-201ENSMUST00000187893 231 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Gm23615-201ENSMUST00000082602 65 ntBASIC3.09□□□□□ -1.92
Scn8aQ9WTU3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm25116-201ENSMUST00000157191 122 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm26215-201ENSMUST00000158584 139 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm22108-201ENSMUST00000177961 106 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm24798-201ENSMUST00000179334 106 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28574-201ENSMUST00000185757 699 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28781-201ENSMUST00000185760 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28339-201ENSMUST00000185845 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28596-201ENSMUST00000185870 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28282-201ENSMUST00000186072 186 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm29574-201ENSMUST00000186226 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28828-201ENSMUST00000186601 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28057-201ENSMUST00000186603 615 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm29307-201ENSMUST00000187367 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28397-201ENSMUST00000187970 699 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28896-201ENSMUST00000188609 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm29339-201ENSMUST00000189613 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm28159-201ENSMUST00000190296 696 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm29366-201ENSMUST00000190481 699 ntBASIC3.08□□□□□ -1.92
Scn8aQ9WTU3 Gm29407-201ENSMUST00000191468 696 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms