Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm29408-201ENSMUST00000187536 216 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm37431-201ENSMUST00000195102 111 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm6929-201ENSMUST00000210930 468 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm4052-201ENSMUST00000220890 451 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm9818-201ENSMUST00000050900 255 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm23628-201ENSMUST00000082464 173 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm25004-201ENSMUST00000083811 161 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm10242-201ENSMUST00000090064 330 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim3Q9R1R2 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm336-201ENSMUST00000186376 1480 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm24096-201ENSMUST00000103905 110 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm25765-201ENSMUST00000104100 132 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm11488-201ENSMUST00000117277 863 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm15126-201ENSMUST00000118631 833 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm15244-201ENSMUST00000121122 130 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm6079-201ENSMUST00000121356 404 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm11982-201ENSMUST00000121480 314 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm24960-201ENSMUST00000157923 90 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm24875-201ENSMUST00000158888 104 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Mir713-201ENSMUST00000178651 108 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm20773-201ENSMUST00000178940 681 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm27538-201ENSMUST00000185065 294 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm5552-201ENSMUST00000197149 515 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm3829-201ENSMUST00000222362 619 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm18338-201ENSMUST00000222381 560 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm22829-201ENSMUST00000083771 106 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.5□□□□□ -1.85
Trim3Q9R1R2 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Trim3Q9R1R2 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm22208-201ENSMUST00000122658 110 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Gm25120-201ENSMUST00000180148 79 ntBASIC3.49□□□□□ -1.85
Trim3Q9R1R2 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms