Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm10237-201ENSMUST00000078393 273 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Snord35b-201ENSMUST00000082833 87 ntBASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Lima1Q9ERG0 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Mir693-201ENSMUST00000102187 89 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm24671-201ENSMUST00000104159 158 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm24987-201ENSMUST00000104453 134 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm15014-201ENSMUST00000120742 258 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm23755-201ENSMUST00000157578 343 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Mir6385-201ENSMUST00000184295 105 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm28002-201ENSMUST00000184832 100 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm4854-201ENSMUST00000185902 574 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm19637-201ENSMUST00000185933 579 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm29704-201ENSMUST00000196011 253 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm19080-201ENSMUST00000196082 550 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm19418-201ENSMUST00000197436 580 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm43124-201ENSMUST00000201878 278 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm7726-201ENSMUST00000206241 231 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Gm39147-201ENSMUST00000211376 465 ntBASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Lima1Q9ERG0 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm23183-201ENSMUST00000122595 323 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm23467-201ENSMUST00000157127 159 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm26141-201ENSMUST00000175299 126 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm37428-201ENSMUST00000193886 137 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm6510-201ENSMUST00000195916 574 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm7034-201ENSMUST00000218638 645 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm25005-201ENSMUST00000083812 156 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Gm25630-201ENSMUST00000084000 162 ntBASIC3.24□□□□□ -1.89
Lima1Q9ERG0 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm22676-201ENSMUST00000116972 129 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm14811-201ENSMUST00000117070 117 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm15060-201ENSMUST00000119550 948 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm16569-201ENSMUST00000160526 314 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm27773-201ENSMUST00000184087 78 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm38053-201ENSMUST00000193938 160 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm38098-201ENSMUST00000194115 241 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm43227-201ENSMUST00000202239 677 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm7380-201ENSMUST00000211599 466 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm7639-201ENSMUST00000212608 484 ntBASIC3.23□□□□□ -1.89
Lima1Q9ERG0 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lima1Q9ERG0 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms