Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm8319-201ENSMUST00000205708 641 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm45173-201ENSMUST00000206819 305 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Upf1Q9EPU0 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm23577-201ENSMUST00000103950 110 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm22590-201ENSMUST00000104247 128 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm12386-201ENSMUST00000117380 688 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm14558-201ENSMUST00000117458 381 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm23332-201ENSMUST00000157424 275 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm27688-201ENSMUST00000183634 91 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm44149-201ENSMUST00000204256 226 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm45499-201ENSMUST00000211656 280 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm45857-201ENSMUST00000212207 356 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC152415.1-201ENSMUST00000213320 440 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm29884-201ENSMUST00000218403 453 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm22572-201ENSMUST00000082985 105 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Mir19a-201ENSMUST00000083482 82 ntBASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Upf1Q9EPU0 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm14307-201ENSMUST00000118930 291 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm14297-201ENSMUST00000129110 291 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm25264-201ENSMUST00000158519 117 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm29031-201ENSMUST00000185316 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm29000-201ENSMUST00000185444 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm28204-201ENSMUST00000185934 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm28290-201ENSMUST00000186505 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm28161-201ENSMUST00000186669 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm28749-209ENSMUST00000189599 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm18403-201ENSMUST00000192907 529 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm33163-201ENSMUST00000194504 614 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm44354-201ENSMUST00000196017 143 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC5.54□□□□□ -1.52
Upf1Q9EPU0 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms