Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm2189-201ENSMUST00000201419 429 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm20177-201ENSMUST00000203705 334 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm9375-201ENSMUST00000208899 903 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm5518-201ENSMUST00000084171 648 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdc40Q9DC48 Gm24982-201ENSMUST00000104456 132 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm11869-201ENSMUST00000118701 329 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm14577-201ENSMUST00000121134 256 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm11233-201ENSMUST00000122357 634 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm23667-201ENSMUST00000157466 120 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm24061-201ENSMUST00000157489 120 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm26000-201ENSMUST00000157991 107 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm20399-201ENSMUST00000174652 132 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Snord92-201ENSMUST00000175548 85 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm2092-201ENSMUST00000178887 639 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm2759-201ENSMUST00000179938 639 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm27445-201ENSMUST00000184484 72 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm5829-201ENSMUST00000191383 351 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm29523-201ENSMUST00000191415 699 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm37290-201ENSMUST00000195775 339 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm45080-201ENSMUST00000206648 283 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 AC154184.2-201ENSMUST00000225335 349 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm25480-201ENSMUST00000083217 133 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm23058-201ENSMUST00000093703 107 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdc40Q9DC48 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm15382-201ENSMUST00000118011 537 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm12691-201ENSMUST00000120186 456 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm12105-201ENSMUST00000120846 779 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm22380-201ENSMUST00000157479 95 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm6900-201ENSMUST00000178971 342 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.31□□□□□ -1.88
Cdc40Q9DC48 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms