Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm14681-201ENSMUST00000118047 411 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm6762-201ENSMUST00000121769 289 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12998-201ENSMUST00000122445 789 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23467-201ENSMUST00000157127 159 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm28030-201ENSMUST00000184987 138 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm37293-201ENSMUST00000191658 295 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm45860-201ENSMUST00000212700 334 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.31□□□□□ -1.88
Ccdc3Q9D6Y1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12118-201ENSMUST00000119766 532 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm22956-201ENSMUST00000122520 80 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23028-201ENSMUST00000158773 265 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm44016-201ENSMUST00000203463 164 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm45474-201ENSMUST00000209471 408 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm39147-201ENSMUST00000211376 465 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm8681-201ENSMUST00000219115 618 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm8785-201ENSMUST00000220259 487 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ccdc3Q9D6Y1 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm23747-201ENSMUST00000104228 131 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm13803-201ENSMUST00000117547 489 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12788-201ENSMUST00000119090 308 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm12858-201ENSMUST00000121913 208 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm25490-201ENSMUST00000158734 130 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm4207-201ENSMUST00000173144 960 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm27374-201ENSMUST00000183660 81 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Mir7k-201ENSMUST00000184115 110 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm35405-201ENSMUST00000218754 400 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm16419-201ENSMUST00000221057 625 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc3Q9D6Y1 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms