Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ddx56Q9D0R4 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.86□□□□□ -1.63
Ddx56Q9D0R4 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ddx56Q9D0R4 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ddx56Q9D0R4 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm22020-201ENSMUST00000104358 136 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Clec2f-201ENSMUST00000121051 374 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm5391-201ENSMUST00000121155 613 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm13743-201ENSMUST00000121486 724 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm24190-201ENSMUST00000157976 216 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm24664-201ENSMUST00000158939 100 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm3191-201ENSMUST00000167139 346 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm38329-201ENSMUST00000193473 427 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm43370-201ENSMUST00000196437 284 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm36259-201ENSMUST00000197340 392 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm19649-201ENSMUST00000201126 822 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm45173-201ENSMUST00000206819 305 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm2607-201ENSMUST00000212389 627 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm18507-201ENSMUST00000218855 525 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ddx56Q9D0R4 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm23594-201ENSMUST00000104307 134 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm11490-201ENSMUST00000118128 272 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm14101-201ENSMUST00000121502 473 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm2182-201ENSMUST00000145243 663 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm24251-201ENSMUST00000157324 114 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm24507-201ENSMUST00000157683 134 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm24689-201ENSMUST00000157760 104 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm17086-201ENSMUST00000171346 484 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm26652-202ENSMUST00000181672 475 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm7909-201ENSMUST00000182688 614 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm27718-201ENSMUST00000183721 86 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Mir7022-201ENSMUST00000183749 61 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm44474-201ENSMUST00000196525 127 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm43524-201ENSMUST00000197278 298 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm45171-201ENSMUST00000206360 736 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm45590-201ENSMUST00000209715 262 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Gm18703-201ENSMUST00000215318 333 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ddx56Q9D0R4 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ddx56Q9D0R4 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Ddx56Q9D0R4 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.84□□□□□ -1.64
Ddx56Q9D0R4 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Gm3940-201ENSMUST00000105087 432 ntBASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.83□□□□□ -1.64
Ddx56Q9D0R4 Gm14067-201ENSMUST00000119340 314 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms