Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm28788-201ENSMUST00000189717 375 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm29558-201ENSMUST00000190134 375 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm37791-201ENSMUST00000195081 286 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm42516-201ENSMUST00000198691 767 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm19244-201ENSMUST00000204340 253 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Use1Q9CQ56 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.34□□□□□ -1.87
Use1Q9CQ56 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Use1Q9CQ56 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Use1Q9CQ56 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm12691-201ENSMUST00000120186 456 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm22480-201ENSMUST00000122568 128 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm4725-201ENSMUST00000151048 587 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm16285-201ENSMUST00000162999 347 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm5929-201ENSMUST00000166883 487 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm27903-201ENSMUST00000175482 126 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm28847-201ENSMUST00000186778 700 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm29365-201ENSMUST00000189461 699 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm42832-201ENSMUST00000196361 745 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm26165-201ENSMUST00000083791 138 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.33□□□□□ -1.88
Use1Q9CQ56 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Use1Q9CQ56 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm11704-201ENSMUST00000120031 214 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm12884-201ENSMUST00000120371 325 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm16005-201ENSMUST00000120515 269 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm16458-201ENSMUST00000121428 502 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm23098-201ENSMUST00000157552 299 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm23592-201ENSMUST00000157859 117 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm22120-201ENSMUST00000175590 70 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm7909-201ENSMUST00000182688 614 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm43894-201ENSMUST00000203274 688 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm44016-201ENSMUST00000203463 164 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm45553-201ENSMUST00000209929 507 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.32□□□□□ -1.88
Use1Q9CQ56 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Use1Q9CQ56 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms