Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm37111-201ENSMUST00000193250 634 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm45409-201ENSMUST00000211486 252 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm45860-201ENSMUST00000212700 334 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr844-201ENSMUST00000054106 930 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cstf1Q99LC2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.69□□□□□ -1.82
Cstf1Q99LC2 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm13868-201ENSMUST00000122411 294 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm26476-201ENSMUST00000122618 313 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm22219-201ENSMUST00000157562 319 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm27592-201ENSMUST00000157729 126 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm22174-201ENSMUST00000175050 125 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm22692-201ENSMUST00000175055 125 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm27634-201ENSMUST00000175060 126 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm22460-201ENSMUST00000175269 124 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm24365-201ENSMUST00000175384 125 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm44310-201ENSMUST00000175424 126 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm22639-201ENSMUST00000175591 125 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm24979-201ENSMUST00000178626 126 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm27743-201ENSMUST00000185136 126 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm3454-201ENSMUST00000185571 412 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm42593-201ENSMUST00000198469 377 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm45344-201ENSMUST00000211610 341 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm18704-201ENSMUST00000219736 446 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Cstf1Q99LC2 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm14981-201ENSMUST00000117325 943 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm14142-201ENSMUST00000117833 296 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm15382-201ENSMUST00000118011 537 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm6274-201ENSMUST00000118173 797 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm11746-201ENSMUST00000119843 821 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm12358-201ENSMUST00000121842 520 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm13131-201ENSMUST00000122228 321 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm24244-201ENSMUST00000157317 130 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm24727-201ENSMUST00000158231 144 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm25369-201ENSMUST00000158848 132 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm20399-201ENSMUST00000174652 132 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Gm22693-201ENSMUST00000175049 442 ntBASIC3.67□□□□□ -1.82
Cstf1Q99LC2 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms