Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm7639-201ENSMUST00000212608 484 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ccdc28aQ8CEI3 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm7853-201ENSMUST00000100708 478 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm24671-201ENSMUST00000104159 158 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm13761-201ENSMUST00000117238 807 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm26254-201ENSMUST00000122491 118 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Snora81-201ENSMUST00000157310 178 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm19791-201ENSMUST00000180398 859 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Mir6398-201ENSMUST00000184541 102 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm4558-201ENSMUST00000207886 521 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm18120-201ENSMUST00000220079 511 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm3565-201ENSMUST00000222670 609 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Diaph3-206ENSMUST00000226745 713 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ccdc28aQ8CEI3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm24581-201ENSMUST00000103962 133 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm14622-201ENSMUST00000117117 468 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm11406-201ENSMUST00000117418 484 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm12448-201ENSMUST00000118852 655 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm13511-201ENSMUST00000121167 363 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm26362-201ENSMUST00000158865 315 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm17030-201ENSMUST00000167016 393 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Samd15-201ENSMUST00000169669 1194 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm27834-201ENSMUST00000183427 125 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm29602-201ENSMUST00000186887 442 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm34272-201ENSMUST00000208886 253 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45574-201ENSMUST00000210921 331 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm18116-201ENSMUST00000220920 537 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm9818-201ENSMUST00000050900 255 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.27□□□□□ -1.89
Ccdc28aQ8CEI3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm11433-201ENSMUST00000118318 228 ntBASIC3.26□□□□□ -1.89
Ccdc28aQ8CEI3 Gm11965-201ENSMUST00000122017 277 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms