Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm18529-201ENSMUST00000193025 1257 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Gm7407-201ENSMUST00000208301 568 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trub1Q8C0D0 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.23□□□□□ -1.89
Trub1Q8C0D0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm24118-201ENSMUST00000103972 126 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm23609-201ENSMUST00000104542 127 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm14534-201ENSMUST00000120045 357 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm20673-201ENSMUST00000177167 430 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm28872-201ENSMUST00000191518 158 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm37085-201ENSMUST00000193780 196 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm36997-201ENSMUST00000195090 707 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm36776-201ENSMUST00000207006 203 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm8423-201ENSMUST00000211387 607 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Trub1Q8C0D0 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trub1Q8C0D0 Gm14987-201ENSMUST00000117820 676 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm6274-201ENSMUST00000118173 797 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm12401-201ENSMUST00000118435 228 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm12515-201ENSMUST00000120116 361 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm14905-201ENSMUST00000122351 639 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm23667-201ENSMUST00000157466 120 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm17153-201ENSMUST00000171314 490 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm29602-201ENSMUST00000186887 442 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Mir142-201ENSMUST00000198092 64 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.21□□□□□ -1.9
Trub1Q8C0D0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm7853-201ENSMUST00000100708 478 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm23441-201ENSMUST00000157268 127 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm20672-201ENSMUST00000176605 261 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm29104-201ENSMUST00000186304 222 ntBASIC3.2□□□□□ -1.9
Trub1Q8C0D0 Gm9775-201ENSMUST00000189402 331 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms