Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23141-201ENSMUST00000178682 94 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm23288-201ENSMUST00000179213 121 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm32175-201ENSMUST00000193641 346 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm33354-201ENSMUST00000195448 906 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm18327-201ENSMUST00000202426 830 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm44818-201ENSMUST00000206608 358 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Usp40Q8BWR4 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Mir759-201ENSMUST00000103254 98 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm15399-201ENSMUST00000118055 724 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm14506-201ENSMUST00000121165 536 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm26256-201ENSMUST00000122499 186 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm22383-201ENSMUST00000158188 327 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm17109-201ENSMUST00000163985 358 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Mir6411-201ENSMUST00000183556 108 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm28151-201ENSMUST00000189404 951 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.95□□□□□ -1.46
Usp40Q8BWR4 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Mir105-201ENSMUST00000104655 80 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm13567-201ENSMUST00000118026 247 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm8129-201ENSMUST00000118230 213 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm15553-201ENSMUST00000118757 430 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm12638-201ENSMUST00000119531 298 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm25104-201ENSMUST00000122476 163 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm7855-201ENSMUST00000137737 687 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm5258-201ENSMUST00000165437 327 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm18604-201ENSMUST00000172535 558 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm25999-201ENSMUST00000175398 133 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm27899-201ENSMUST00000184715 64 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm37501-201ENSMUST00000192830 691 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm37616-201ENSMUST00000193974 322 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm45523-201ENSMUST00000210712 799 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm6929-201ENSMUST00000210930 468 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Gm19441-201ENSMUST00000221545 330 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Usp40Q8BWR4 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm8666-201ENSMUST00000117517 292 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm11262-201ENSMUST00000119326 833 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Gm22479-201ENSMUST00000122566 81 ntBASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.93□□□□□ -1.46
Usp40Q8BWR4 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms