Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm44852-201ENSMUST00000207950 369 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Gm46369-201ENSMUST00000221577 401 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc40Q8BI79 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Ccdc40Q8BI79 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Ccdc40Q8BI79 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.9□□□□□ -1.78
Ccdc40Q8BI79 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ccdc40Q8BI79 Gm22269-201ENSMUST00000104002 130 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm13567-201ENSMUST00000118026 247 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm13122-201ENSMUST00000118380 453 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm11575-201ENSMUST00000122243 228 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm24550-201ENSMUST00000158648 279 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm17194-201ENSMUST00000164610 348 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm19203-201ENSMUST00000174049 939 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Mir1251-201ENSMUST00000175486 84 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm43559-201ENSMUST00000198755 466 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm43155-201ENSMUST00000202661 494 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm19253-201ENSMUST00000204279 307 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm19244-201ENSMUST00000204340 253 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm7099-201ENSMUST00000080066 554 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm24626-201ENSMUST00000082621 161 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm23443-201ENSMUST00000082916 128 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm10780-201ENSMUST00000099459 285 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.9□□□□□ -1.79
Ccdc40Q8BI79 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm23697-201ENSMUST00000103897 110 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Mir208b-201ENSMUST00000104735 77 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm13379-201ENSMUST00000118053 621 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm15387-201ENSMUST00000120421 648 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm26148-201ENSMUST00000157430 68 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm28011-201ENSMUST00000184097 175 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm29513-201ENSMUST00000185741 202 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm37164-201ENSMUST00000192809 637 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm42593-201ENSMUST00000198469 377 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm44099-201ENSMUST00000203299 112 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm18672-201ENSMUST00000208035 270 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm44656-201ENSMUST00000208428 490 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm46194-201ENSMUST00000218136 320 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm40598-201ENSMUST00000222953 547 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm23628-201ENSMUST00000082464 173 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm25699-201ENSMUST00000082896 167 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Gm5518-201ENSMUST00000084171 648 ntBASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc40Q8BI79 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm23273-201ENSMUST00000104058 135 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm22493-201ENSMUST00000104494 132 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm14753-201ENSMUST00000118503 246 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm9308-201ENSMUST00000119073 448 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm15157-201ENSMUST00000121852 702 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm16363-201ENSMUST00000132460 877 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm25436-201ENSMUST00000158275 145 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Gm16569-201ENSMUST00000160526 314 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.88□□□□□ -1.79
Ccdc40Q8BI79 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms