Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.34□□□□□ -1.71
Ubfd1Q78JW9 Gm16261-201ENSMUST00000096813 205 ntBASIC4.34□□□□□ -1.71
Ubfd1Q78JW9 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.34□□□□□ -1.71
Ubfd1Q78JW9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ubfd1Q78JW9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ubfd1Q78JW9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Ubfd1Q78JW9 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Mir592-201ENSMUST00000102113 96 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm23178-201ENSMUST00000116782 95 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm22488-201ENSMUST00000116811 127 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm6062-201ENSMUST00000120462 631 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm24060-201ENSMUST00000157494 95 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm24537-201ENSMUST00000157950 102 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm22076-201ENSMUST00000158601 84 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Mir6899-201ENSMUST00000184798 64 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm28927-201ENSMUST00000191528 272 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm37771-201ENSMUST00000193121 265 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm19032-201ENSMUST00000208584 592 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm17779-201ENSMUST00000213395 394 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Snord22-201ENSMUST00000083153 126 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Gm25821-201ENSMUST00000093657 133 ntBASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ubfd1Q78JW9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm24120-201ENSMUST00000103978 129 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm22493-201ENSMUST00000104494 132 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm11698-201ENSMUST00000117948 455 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm14172-201ENSMUST00000118255 644 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm14293-201ENSMUST00000118528 577 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm11830-201ENSMUST00000120175 561 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm12006-201ENSMUST00000120786 403 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm24836-201ENSMUST00000122609 108 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm2020-201ENSMUST00000145242 579 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm25883-201ENSMUST00000157781 271 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm22637-201ENSMUST00000158144 283 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm22765-201ENSMUST00000158371 128 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm17177-201ENSMUST00000169144 483 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm8649-201ENSMUST00000181799 233 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm43856-201ENSMUST00000197004 369 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm44371-201ENSMUST00000204148 467 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Gm45048-201ENSMUST00000207058 429 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ubfd1Q78JW9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubfd1Q78JW9 Mir676-201ENSMUST00000102443 89 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms