Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm24505-201ENSMUST00000157682 126 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm19203-201ENSMUST00000174049 939 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm25817-201ENSMUST00000177758 121 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Mir713-201ENSMUST00000178651 108 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm24766-201ENSMUST00000179182 121 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm18296-201ENSMUST00000192475 783 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm43232-201ENSMUST00000201346 364 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm7468-201ENSMUST00000203900 652 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm7786-201ENSMUST00000210494 436 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm23447-201ENSMUST00000082798 163 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Mir132-201ENSMUST00000083603 66 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Gm26108-201ENSMUST00000083973 191 ntBASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ddx55Q6ZPL9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Ddx55Q6ZPL9 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.96□□□□□ -1.61
Ddx55Q6ZPL9 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm24281-201ENSMUST00000104234 136 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm12173-201ENSMUST00000117622 273 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm11352-201ENSMUST00000119264 517 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm12935-201ENSMUST00000119352 246 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm14591-201ENSMUST00000120407 518 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm13787-201ENSMUST00000120422 168 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm23981-201ENSMUST00000157136 106 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm23782-201ENSMUST00000157939 120 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm26036-201ENSMUST00000158149 144 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm22076-201ENSMUST00000158601 84 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm28974-201ENSMUST00000187893 231 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm36998-201ENSMUST00000193205 704 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm43601-201ENSMUST00000196294 945 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm43855-201ENSMUST00000197462 507 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Gm18026-201ENSMUST00000222789 727 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 AC115735.3-201ENSMUST00000227757 513 ntBASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ddx55Q6ZPL9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm11488-201ENSMUST00000117277 863 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm11268-201ENSMUST00000118347 267 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm14785-201ENSMUST00000120185 539 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm22792-201ENSMUST00000157225 133 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm23496-201ENSMUST00000157741 248 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm25553-201ENSMUST00000158076 79 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Gm25520-201ENSMUST00000158389 118 ntBASIC4.95□□□□□ -1.62
Ddx55Q6ZPL9 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms