Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm29573-201ENSMUST00000190291 919 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm38201-201ENSMUST00000192143 387 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm37599-201ENSMUST00000193067 489 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm43142-201ENSMUST00000198670 361 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.71□□□□□ -1.82
Six3Q62233 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Gm43155-201ENSMUST00000202661 494 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm44099-201ENSMUST00000203299 112 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm44634-201ENSMUST00000206119 152 ntBASIC3.71□□□□□ -1.82
Six3Q62233 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.71□□□□□ -1.82
Six3Q62233 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm17829-201ENSMUST00000219782 344 ntBASIC3.71□□□□□ -1.82
Six3Q62233 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.71□□□□□ -1.82
Six3Q62233 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm3829-201ENSMUST00000222362 619 ntBASIC3.71□□□□□ -1.82
Six3Q62233 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.71□□□□□ -1.82
Six3Q62233 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Six3Q62233 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.71□□□□□ -1.82
Six3Q62233 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Six3Q62233 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.7□□□□□ -1.82
Six3Q62233 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Six3Q62233 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Mir551b-201ENSMUST00000102165 98 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm24273-201ENSMUST00000102332 164 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm25560-201ENSMUST00000104606 176 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm13678-201ENSMUST00000118926 340 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm14731-201ENSMUST00000119216 376 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm13868-201ENSMUST00000122411 294 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm22988-201ENSMUST00000122759 144 ntBASIC3.7□□□□□ -1.82
Six3Q62233 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Gm23591-201ENSMUST00000157663 286 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm24850-201ENSMUST00000158029 119 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm25557-201ENSMUST00000158084 315 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm25605-201ENSMUST00000158364 124 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm20693-201ENSMUST00000177431 211 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm10067-201ENSMUST00000179462 348 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm11394-201ENSMUST00000181421 517 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Gm37416-201ENSMUST00000193596 318 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.7□□□□□ -1.82
Six3Q62233 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Gm44887-201ENSMUST00000208980 178 ntBASIC3.7□□□□□ -1.82
Six3Q62233 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.7□□□□□ -1.82
Six3Q62233 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.7□□□□□ -1.82
Six3Q62233 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.7□□□□□ -1.82
Six3Q62233 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Six3Q62233 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Six3Q62233 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Six3Q62233 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Six3Q62233 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms