Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm17085-201ENSMUST00000165425 502 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm17177-201ENSMUST00000169144 483 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.43□□□□□ -1.7
CtcfQ61164 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.43□□□□□ -1.7
CtcfQ61164 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm4842-201ENSMUST00000183237 835 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Mir7658-201ENSMUST00000184043 57 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm27942-201ENSMUST00000184669 101 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm44404-201ENSMUST00000203979 636 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm20039-201ENSMUST00000210329 394 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm18441-201ENSMUST00000223539 617 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 CT030662.1-201ENSMUST00000227380 232 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CtcfQ61164 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.43□□□□□ -1.7
CtcfQ61164 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CtcfQ61164 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CtcfQ61164 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CtcfQ61164 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
CtcfQ61164 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CtcfQ61164 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm24788-201ENSMUST00000104283 156 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm22493-201ENSMUST00000104494 132 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm11898-201ENSMUST00000117161 385 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm13550-201ENSMUST00000118185 525 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm14541-201ENSMUST00000118985 157 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm14607-201ENSMUST00000119119 491 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm5942-201ENSMUST00000120046 439 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm2892-201ENSMUST00000145537 711 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm22314-201ENSMUST00000158007 281 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm3084-201ENSMUST00000169967 598 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CtcfQ61164 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm27952-201ENSMUST00000184748 105 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm18727-201ENSMUST00000185981 553 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm29263-201ENSMUST00000188718 463 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm37167-201ENSMUST00000194946 396 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm17780-201ENSMUST00000207142 612 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm45658-201ENSMUST00000209197 580 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 AL603630.1-201ENSMUST00000214781 147 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 AC116465.1-201ENSMUST00000220324 235 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
CtcfQ61164 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.42□□□□□ -1.7
CtcfQ61164 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CtcfQ61164 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC4.42□□□□□ -1.7
CtcfQ61164 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
CtcfQ61164 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CtcfQ61164 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CtcfQ61164 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CtcfQ61164 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CtcfQ61164 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CtcfQ61164 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CtcfQ61164 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.41□□□□□ -1.7
CtcfQ61164 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CtcfQ61164 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms