Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Gm5755-201ENSMUST00000152394 837 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Gm15974-201ENSMUST00000159103 531 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Gm5929-201ENSMUST00000166883 487 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Gm9587-201ENSMUST00000172449 454 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.38□□□□□ -1.87
Usf1Q61069 Gm7142-201ENSMUST00000194232 586 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Gm3010-201ENSMUST00000198805 448 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Gm18704-201ENSMUST00000219736 446 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usf1Q61069 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usf1Q61069 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.38□□□□□ -1.87
Usf1Q61069 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usf1Q61069 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm25097-201ENSMUST00000104042 145 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm24067-201ENSMUST00000104514 85 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm15488-201ENSMUST00000121682 670 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm24380-201ENSMUST00000122696 324 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm16331-201ENSMUST00000144274 498 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm37698-201ENSMUST00000192605 463 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 AC159293.2-201ENSMUST00000222289 424 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usf1Q61069 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 Snord15a-201ENSMUST00000083888 148 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm25630-201ENSMUST00000084000 162 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Usf1Q61069 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usf1Q61069 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Usf1Q61069 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.37□□□□□ -1.87
Usf1Q61069 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm23747-201ENSMUST00000104228 131 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm12902-201ENSMUST00000118389 322 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm11869-201ENSMUST00000118701 329 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm13831-201ENSMUST00000118764 302 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm12543-201ENSMUST00000120410 543 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm26171-201ENSMUST00000158422 131 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm9613-201ENSMUST00000171662 196 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm18604-201ENSMUST00000172535 558 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.36□□□□□ -1.87
Usf1Q61069 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm27952-201ENSMUST00000184748 105 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Usf1Q61069 Gm8641-201ENSMUST00000186995 826 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm5368-201ENSMUST00000189012 589 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.36□□□□□ -1.87
Usf1Q61069 Gm37081-201ENSMUST00000192034 196 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms