Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm21633-201ENSMUST00000178941 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm17412-201ENSMUST00000179261 468 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21821-201ENSMUST00000179646 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21588-201ENSMUST00000180074 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21780-201ENSMUST00000180128 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21572-201ENSMUST00000180134 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21529-201ENSMUST00000180175 498 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm29370-202ENSMUST00000187476 499 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm25004-201ENSMUST00000083811 161 ntBASIC3.67□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm24119-201ENSMUST00000103979 246 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm7071-201ENSMUST00000120458 462 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm11260-201ENSMUST00000121163 942 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm24958-201ENSMUST00000158009 97 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm44972-201ENSMUST00000206419 406 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm4052-201ENSMUST00000220890 451 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ccdc88aQ5SNZ0 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
Ccdc88aQ5SNZ0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ccdc88aQ5SNZ0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ccdc88aQ5SNZ0 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.65□□□□□ -1.82
Ccdc88aQ5SNZ0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Ccdc88aQ5SNZ0 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm4468-201ENSMUST00000170206 294 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26297-201ENSMUST00000179464 132 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm20574-201ENSMUST00000182867 917 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm38075-201ENSMUST00000191979 920 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm2979-201ENSMUST00000193442 463 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 AC105169.1-201ENSMUST00000218912 1294 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm5392-201ENSMUST00000122189 789 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm23229-201ENSMUST00000157297 105 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm20672-201ENSMUST00000176605 261 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm18486-201ENSMUST00000184040 298 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm43601-201ENSMUST00000196294 945 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.64□□□□□ -1.83
Ccdc88aQ5SNZ0 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm12739-201ENSMUST00000119769 382 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm11866-201ENSMUST00000120209 335 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm23960-201ENSMUST00000157206 131 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm23957-201ENSMUST00000157209 90 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26028-201ENSMUST00000158660 294 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm26238-201ENSMUST00000175538 117 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ccdc88aQ5SNZ0 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms