Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm25728-201ENSMUST00000104525 159 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm12697-201ENSMUST00000118008 667 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm14506-201ENSMUST00000121165 536 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm25979-201ENSMUST00000157177 138 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Mir5106-201ENSMUST00000174936 73 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm23053-201ENSMUST00000175136 96 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm26988-201ENSMUST00000183296 945 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm42832-201ENSMUST00000196361 745 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Mir6906-201ENSMUST00000198998 58 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm43919-201ENSMUST00000204303 364 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm43922-201ENSMUST00000205071 328 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm4501-201ENSMUST00000207330 551 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm4528-201ENSMUST00000207905 551 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm45651-201ENSMUST00000210857 335 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm25200-201ENSMUST00000083094 130 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav3-1Q5R1I8 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm24119-201ENSMUST00000103979 246 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm15206-201ENSMUST00000119143 454 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm11600-201ENSMUST00000119592 240 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm14531-201ENSMUST00000120845 285 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm24939-201ENSMUST00000158325 137 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm16589-201ENSMUST00000159522 918 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm24819-201ENSMUST00000175094 166 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm25476-201ENSMUST00000175125 185 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm13249-201ENSMUST00000177803 345 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Mir6374-201ENSMUST00000184003 107 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Mir6238-201ENSMUST00000184140 129 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm1833-201ENSMUST00000191608 682 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm43018-201ENSMUST00000198075 1275 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm45081-201ENSMUST00000206281 572 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm8264-201ENSMUST00000217801 465 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm8158-201ENSMUST00000219220 465 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm8112-201ENSMUST00000219637 465 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm36501-201ENSMUST00000221857 745 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav3-1Q5R1I8 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm15076-201ENSMUST00000117076 474 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm13268-201ENSMUST00000117485 433 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm11460-201ENSMUST00000118200 361 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm13887-201ENSMUST00000119009 344 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm13489-201ENSMUST00000121234 971 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm14389-201ENSMUST00000140453 241 ntBASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC2.04□□□□□ -2.08
Trav3-1Q5R1I8 Gm23327-201ENSMUST00000157420 78 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms