Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Gm18507-201ENSMUST00000218855 525 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Gm9309-201ENSMUST00000223537 546 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 AL662807.1-201ENSMUST00000224183 126 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Snora70-201ENSMUST00000083047 137 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Gm5653-201ENSMUST00000223393 1337 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Trav5d-4Q5R1F6 Gm43259-201ENSMUST00000198446 3277 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm25727-201ENSMUST00000104522 131 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm12880-201ENSMUST00000120652 494 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm14383-201ENSMUST00000121637 386 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm6374-201ENSMUST00000159051 788 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm27648-201ENSMUST00000184315 107 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm43198-201ENSMUST00000200927 326 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm45474-201ENSMUST00000209471 408 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm18225-201ENSMUST00000216708 742 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm8274-201ENSMUST00000219820 463 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Gm21007-201ENSMUST00000221024 326 ntBASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm9597-202ENSMUST00000227632 1387 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm26075-201ENSMUST00000104062 121 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm13076-201ENSMUST00000118041 204 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm26254-201ENSMUST00000122491 118 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm25667-201ENSMUST00000157701 275 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm3123-201ENSMUST00000163480 480 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm27538-201ENSMUST00000185065 294 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm19080-201ENSMUST00000196082 550 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm19418-201ENSMUST00000197436 580 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm44690-201ENSMUST00000207984 382 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm20074-201ENSMUST00000208144 484 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 AC115750.1-201ENSMUST00000220441 567 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm23136-201ENSMUST00000083425 99 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Mir101b-201ENSMUST00000083622 97 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm45540-201ENSMUST00000209271 3606 ntBASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Trav5d-4Q5R1F6 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm24541-201ENSMUST00000103871 96 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm14622-201ENSMUST00000117117 468 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm12230-201ENSMUST00000118301 454 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm14253-201ENSMUST00000122112 639 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm29525-201ENSMUST00000189844 699 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm37828-201ENSMUST00000192496 432 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.79□□□□□ -1.96
Trav5d-4Q5R1F6 Gm18597-201ENSMUST00000209519 694 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms