Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28685-201ENSMUST00000187545 1101 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm42925-201ENSMUST00000197359 285 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 AC122188.1-201ENSMUST00000217534 312 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm43648-201ENSMUST00000197775 2485 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Gm43361-201ENSMUST00000196562 4690 ntBASIC9.43□□□□□ -0.9
Trim41Q5NCC3 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm24429-201ENSMUST00000104076 132 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm16250-201ENSMUST00000148974 256 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm6872-201ENSMUST00000165001 700 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Mir3964-201ENSMUST00000174898 74 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm7656-201ENSMUST00000182468 1004 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm7652-201ENSMUST00000200440 1151 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 AC171206.1-201ENSMUST00000213612 213 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 AC125543.1-201ENSMUST00000222778 101 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 AC133076.1-201ENSMUST00000228074 484 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm24706-201ENSMUST00000082806 137 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm25139-201ENSMUST00000083247 210 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm22744-201ENSMUST00000083444 65 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm25008-201ENSMUST00000083809 81 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Gm42994-201ENSMUST00000195964 2549 ntBASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trim41Q5NCC3 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm37551-201ENSMUST00000195556 2861 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm11923-201ENSMUST00000118135 508 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm25176-201ENSMUST00000122640 125 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm25913-201ENSMUST00000157617 135 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm26320-201ENSMUST00000157742 306 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm34176-201ENSMUST00000192621 474 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm37670-201ENSMUST00000193622 229 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm10237-201ENSMUST00000078393 273 ntBASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trim41Q5NCC3 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm13311-201ENSMUST00000117863 379 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm15844-201ENSMUST00000118016 576 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm3788-201ENSMUST00000119949 136 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm13725-201ENSMUST00000122139 207 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm24240-201ENSMUST00000157785 135 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm24961-201ENSMUST00000157918 184 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm9294-201ENSMUST00000165198 789 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm22395-201ENSMUST00000177427 96 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm45157-201ENSMUST00000208729 401 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm6988-201ENSMUST00000222676 375 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim41Q5NCC3 AC165953.1-201ENSMUST00000226386 357 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm22456-201ENSMUST00000082578 125 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Gm22974-201ENSMUST00000083301 103 ntBASIC9.4□□□□□ -0.9
Trim41Q5NCC3 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim41Q5NCC3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 AC158938.1-201ENSMUST00000225372 6720 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm15786-201ENSMUST00000121079 450 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm11384-201ENSMUST00000121376 303 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm24858-201ENSMUST00000158058 323 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm22537-201ENSMUST00000158172 199 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm27490-201ENSMUST00000184754 128 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Igkv13-64-201ENSMUST00000198143 343 ntBASIC9.39□□□□□ -0.91
Trim41Q5NCC3 Gm35931-201ENSMUST00000203931 448 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms