Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm22398-201ENSMUST00000174941 125 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm25731-201ENSMUST00000175167 125 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm22776-201ENSMUST00000178634 94 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm23767-201ENSMUST00000179278 94 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm5527-201ENSMUST00000179821 642 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Mir7020-201ENSMUST00000183787 70 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm37878-201ENSMUST00000192108 387 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm8823-201ENSMUST00000193158 433 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm5338-201ENSMUST00000209530 639 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm45727-201ENSMUST00000212886 572 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm5175-202ENSMUST00000219699 529 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm7540-201ENSMUST00000219764 926 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 AC150560.3-201ENSMUST00000227442 455 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm22304-201ENSMUST00000082688 129 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Mir30e-201ENSMUST00000083475 92 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim40Q3UWA4 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.56□□□□□ -1.84
Trim40Q3UWA4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm26377-201ENSMUST00000102184 108 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Snora64-201ENSMUST00000104521 134 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm14677-201ENSMUST00000117866 486 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm15244-201ENSMUST00000121122 130 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm9001-201ENSMUST00000121642 399 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm11692-201ENSMUST00000122121 902 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm22107-201ENSMUST00000122548 100 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm24061-201ENSMUST00000157489 120 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm26556-201ENSMUST00000180645 320 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm18505-201ENSMUST00000187360 790 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm45878-201ENSMUST00000211839 241 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm18225-201ENSMUST00000216708 742 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm9973-202ENSMUST00000220926 166 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.55□□□□□ -1.84
Trim40Q3UWA4 Gm35558-202ENSMUST00000221819 499 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms